Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL21A1Q96P44 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL21A1Q96P44 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
COL21A1Q96P44 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL21A1Q96P44 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL21A1Q96P44 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL21A1Q96P44 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.43
COL21A1Q96P44 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL21A1Q96P44 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL21A1Q96P44 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.77■□□□□ 0.43
COL21A1Q96P44 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.76■□□□□ 0.43
COL21A1Q96P44 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.76■□□□□ 0.43
COL21A1Q96P44 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL21A1Q96P44 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL21A1Q96P44 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.76■□□□□ 0.43
COL21A1Q96P44 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL21A1Q96P44 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.76■□□□□ 0.43
COL21A1Q96P44 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.76■□□□□ 0.43
COL21A1Q96P44 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL21A1Q96P44 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
COL21A1Q96P44 AC009113.1-201ENST00000570267 2443 ntBASIC17.76■□□□□ 0.43
COL21A1Q96P44 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
COL21A1Q96P44 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
COL21A1Q96P44 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL21A1Q96P44 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.76■□□□□ 0.43
COL21A1Q96P44 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
COL21A1Q96P44 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.76■□□□□ 0.43
COL21A1Q96P44 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.76■□□□□ 0.43
COL21A1Q96P44 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.76■□□□□ 0.43
COL21A1Q96P44 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.76■□□□□ 0.43
COL21A1Q96P44 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.76■□□□□ 0.43
COL21A1Q96P44 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.76■□□□□ 0.43
COL21A1Q96P44 AC026271.3-201ENST00000571884 352 ntBASIC17.76■□□□□ 0.43
COL21A1Q96P44 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.76■□□□□ 0.43
COL21A1Q96P44 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL21A1Q96P44 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL21A1Q96P44 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
COL21A1Q96P44 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL21A1Q96P44 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL21A1Q96P44 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL21A1Q96P44 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL21A1Q96P44 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL21A1Q96P44 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL21A1Q96P44 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.75■□□□□ 0.43
COL21A1Q96P44 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.75■□□□□ 0.43
COL21A1Q96P44 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
COL21A1Q96P44 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.75■□□□□ 0.43
COL21A1Q96P44 AC090340.1-201ENST00000620778 4980 ntBASIC17.75■□□□□ 0.43
COL21A1Q96P44 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.75■□□□□ 0.43
COL21A1Q96P44 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.75■□□□□ 0.43
COL21A1Q96P44 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.75■□□□□ 0.43
COL21A1Q96P44 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
COL21A1Q96P44 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.75■□□□□ 0.43
COL21A1Q96P44 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.75■□□□□ 0.43
COL21A1Q96P44 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.75■□□□□ 0.43
COL21A1Q96P44 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.75■□□□□ 0.43
COL21A1Q96P44 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 AL031598.1-201ENST00000561511 1773 ntBASIC17.75■□□□□ 0.43
COL21A1Q96P44 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 AC104581.1-202ENST00000635932 2618 ntBASIC17.75■□□□□ 0.43
COL21A1Q96P44 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
COL21A1Q96P44 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL21A1Q96P44 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL21A1Q96P44 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL21A1Q96P44 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL21A1Q96P44 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL21A1Q96P44 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL21A1Q96P44 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL21A1Q96P44 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL21A1Q96P44 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL21A1Q96P44 AC135050.7-201ENST00000624508 2218 ntBASIC17.74■□□□□ 0.43
COL21A1Q96P44 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COL21A1Q96P44 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL21A1Q96P44 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL21A1Q96P44 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL21A1Q96P44 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.74■□□□□ 0.43
COL21A1Q96P44 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL21A1Q96P44 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.74■□□□□ 0.43
COL21A1Q96P44 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.74■□□□□ 0.43
COL21A1Q96P44 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.74■□□□□ 0.43
COL21A1Q96P44 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.74■□□□□ 0.43
COL21A1Q96P44 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL21A1Q96P44 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms