Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 DUX4L16-201ENST00000555130 1264 ntBASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 TFP1-202ENST00000475455 1573 ntBASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CHMP6Q96FZ7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 TNRC18P3-201ENST00000441896 2691 ntBASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 PKD1P1-201ENST00000458669 6805 ntBASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 AC007322.1-201ENST00000426983 750 ntBASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 SLC25A6P5-201ENST00000435663 894 ntBASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 AL162412.1-201ENST00000567129 965 ntBASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 AC100791.3-201ENST00000617619 330 ntBASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP6Q96FZ7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 AC069236.1-201ENST00000604339 616 ntBASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP6Q96FZ7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.89■□□□□ 0.62
CHMP6Q96FZ7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CHMP6Q96FZ7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHMP6Q96FZ7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHMP6Q96FZ7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.89■□□□□ 0.61
CHMP6Q96FZ7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms