Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 KRASP1-201ENST00000407852 552 ntBASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 AC131212.4-201ENST00000623606 975 ntBASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS37AQ8NEZ2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 AC135050.7-201ENST00000624508 2218 ntBASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS37AQ8NEZ2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 ID1-201ENST00000376105 1233 ntBASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS37AQ8NEZ2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
VPS37AQ8NEZ2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
VPS37AQ8NEZ2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms