Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PPP3CAQ08209 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP3CAQ08209 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
PPP3CAQ08209 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
PPP3CAQ08209 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.27■□□□□ 0.84
PPP3CAQ08209 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.27■□□□□ 0.84
PPP3CAQ08209 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP3CAQ08209 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP3CAQ08209 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.27■□□□□ 0.84
PPP3CAQ08209 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP3CAQ08209 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PPP3CAQ08209 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
PPP3CAQ08209 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.27■□□□□ 0.84
PPP3CAQ08209 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.27■□□□□ 0.84
PPP3CAQ08209 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP3CAQ08209 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.27■□□□□ 0.83
PPP3CAQ08209 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PPP3CAQ08209 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PPP3CAQ08209 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
PPP3CAQ08209 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.26■□□□□ 0.83
PPP3CAQ08209 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP3CAQ08209 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
PPP3CAQ08209 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PPP3CAQ08209 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.26■□□□□ 0.83
PPP3CAQ08209 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP3CAQ08209 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PPP3CAQ08209 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP3CAQ08209 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.26■□□□□ 0.83
PPP3CAQ08209 MCCD1P1-208ENST00000445732 328 ntBASIC20.26■□□□□ 0.83
PPP3CAQ08209 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.26■□□□□ 0.83
PPP3CAQ08209 EGLN1P1-201ENST00000531623 762 ntBASIC20.26■□□□□ 0.83
PPP3CAQ08209 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.26■□□□□ 0.83
PPP3CAQ08209 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PPP3CAQ08209 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.26■□□□□ 0.83
PPP3CAQ08209 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP3CAQ08209 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP3CAQ08209 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
PPP3CAQ08209 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP3CAQ08209 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP3CAQ08209 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.26■□□□□ 0.83
PPP3CAQ08209 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PPP3CAQ08209 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP3CAQ08209 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CAQ08209 AC005082.1-201ENST00000413042 2259 ntBASIC20.25■□□□□ 0.83
PPP3CAQ08209 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CAQ08209 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.25■□□□□ 0.83
PPP3CAQ08209 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CAQ08209 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CAQ08209 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CAQ08209 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CAQ08209 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CAQ08209 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.25■□□□□ 0.83
PPP3CAQ08209 AC009113.1-201ENST00000570267 2443 ntBASIC20.25■□□□□ 0.83
PPP3CAQ08209 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CAQ08209 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CAQ08209 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CAQ08209 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.25■□□□□ 0.83
PPP3CAQ08209 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CAQ08209 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CAQ08209 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CAQ08209 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CAQ08209 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
PPP3CAQ08209 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PPP3CAQ08209 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.25■□□□□ 0.83
PPP3CAQ08209 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.25■□□□□ 0.83
PPP3CAQ08209 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.25■□□□□ 0.83
PPP3CAQ08209 CCR12P-201ENST00000446203 998 ntBASIC20.25■□□□□ 0.83
PPP3CAQ08209 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.25■□□□□ 0.83
PPP3CAQ08209 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.25■□□□□ 0.83
PPP3CAQ08209 NAPSB-206ENST00000562112 1266 ntBASIC20.25■□□□□ 0.83
PPP3CAQ08209 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.25■□□□□ 0.83
PPP3CAQ08209 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.25■□□□□ 0.83
PPP3CAQ08209 AC116562.4-202ENST00000641738 218 ntBASIC20.25■□□□□ 0.83
PPP3CAQ08209 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CAQ08209 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CAQ08209 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PPP3CAQ08209 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CAQ08209 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PPP3CAQ08209 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.25■□□□□ 0.83
PPP3CAQ08209 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.25■□□□□ 0.83
PPP3CAQ08209 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CAQ08209 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP3CAQ08209 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.24■□□□□ 0.83
PPP3CAQ08209 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP3CAQ08209 AC126763.1-201ENST00000552015 2118 ntBASIC20.24■□□□□ 0.83
PPP3CAQ08209 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP3CAQ08209 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP3CAQ08209 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP3CAQ08209 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP3CAQ08209 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP3CAQ08209 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.24■□□□□ 0.83
PPP3CAQ08209 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP3CAQ08209 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.24■□□□□ 0.83
PPP3CAQ08209 MIR564-202ENST00000385049 94 ntBASIC20.24■□□□□ 0.83
PPP3CAQ08209 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP3CAQ08209 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.24■□□□□ 0.83
PPP3CAQ08209 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.24■□□□□ 0.83
PPP3CAQ08209 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.24■□□□□ 0.83
PPP3CAQ08209 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.24■□□□□ 0.83
PPP3CAQ08209 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms