Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 PP12613-201ENST00000424958 2230 ntBASIC15.16■□□□□ 0.02
APOC3P02656 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC3P02656 AP004607.4-201ENST00000530158 1459 ntBASIC15.16■□□□□ 0.02
APOC3P02656 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
APOC3P02656 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC3P02656 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.16■□□□□ 0.02
APOC3P02656 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC3P02656 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC3P02656 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC3P02656 IRX1P1-201ENST00000438849 1838 ntBASIC15.16■□□□□ 0.02
APOC3P02656 HES4-202ENST00000428771 1040 ntTSL 2 BASIC15.16■□□□□ 0.02
APOC3P02656 HYI-210ENST00000486909 905 ntTSL 5 BASIC15.16■□□□□ 0.02
APOC3P02656 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC3P02656 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC15.16■□□□□ 0.02
APOC3P02656 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC15.16■□□□□ 0.02
APOC3P02656 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC3P02656 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.16■□□□□ 0.02
APOC3P02656 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC3P02656 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
APOC3P02656 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.16■□□□□ 0.02
APOC3P02656 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
APOC3P02656 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC3P02656 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.16■□□□□ 0.02
APOC3P02656 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC3P02656 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC3P02656 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.16■□□□□ 0.02
APOC3P02656 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC3P02656 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC3P02656 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
APOC3P02656 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
APOC3P02656 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.16■□□□□ 0.02
APOC3P02656 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
APOC3P02656 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC3P02656 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC3P02656 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APOC3P02656 LINC02199-201ENST00000506655 2702 ntBASIC15.16■□□□□ 0.02
APOC3P02656 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
APOC3P02656 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
APOC3P02656 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.15■□□□□ 0.02
APOC3P02656 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
APOC3P02656 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
APOC3P02656 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
APOC3P02656 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC3P02656 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
APOC3P02656 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC3P02656 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
APOC3P02656 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.15■□□□□ 0.02
APOC3P02656 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC15.15■□□□□ 0.02
APOC3P02656 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
APOC3P02656 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.15■□□□□ 0.02
APOC3P02656 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC3P02656 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.15■□□□□ 0.02
APOC3P02656 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.15■□□□□ 0.02
APOC3P02656 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
APOC3P02656 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC3P02656 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC3P02656 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC3P02656 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
APOC3P02656 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC3P02656 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
APOC3P02656 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
APOC3P02656 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOC3P02656 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
APOC3P02656 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
APOC3P02656 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
APOC3P02656 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
APOC3P02656 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOC3P02656 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOC3P02656 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.14■□□□□ 0.01
APOC3P02656 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOC3P02656 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOC3P02656 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.14■□□□□ 0.01
APOC3P02656 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOC3P02656 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOC3P02656 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOC3P02656 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
APOC3P02656 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOC3P02656 AP001094.4-201ENST00000579008 2176 ntBASIC15.14■□□□□ 0.01
APOC3P02656 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
APOC3P02656 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOC3P02656 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOC3P02656 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.14■□□□□ 0.01
APOC3P02656 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
APOC3P02656 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
APOC3P02656 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.14■□□□□ 0.01
APOC3P02656 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOC3P02656 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOC3P02656 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC15.14■□□□□ 0.01
APOC3P02656 AC016575.1-201ENST00000607026 382 ntBASIC15.14■□□□□ 0.01
APOC3P02656 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOC3P02656 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.14■□□□□ 0.01
APOC3P02656 KRT8P36-201ENST00000489121 1440 ntBASIC15.14■□□□□ 0.01
APOC3P02656 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
APOC3P02656 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
APOC3P02656 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOC3P02656 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
APOC3P02656 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
APOC3P02656 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOC3P02656 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.14■□□□□ 0.01
APOC3P02656 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms