Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.99■□□□□ 0.63
SMAD6O43541 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SMAD6O43541 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMAD6O43541 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
SMAD6O43541 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMAD6O43541 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.99■□□□□ 0.63
SMAD6O43541 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMAD6O43541 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMAD6O43541 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.98■□□□□ 0.63
SMAD6O43541 HEIH-201ENST00000623091 1652 ntBASIC18.98■□□□□ 0.63
SMAD6O43541 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SMAD6O43541 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMAD6O43541 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SMAD6O43541 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.98■□□□□ 0.63
SMAD6O43541 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.98■□□□□ 0.63
SMAD6O43541 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMAD6O43541 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
SMAD6O43541 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMAD6O43541 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMAD6O43541 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMAD6O43541 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.98■□□□□ 0.63
SMAD6O43541 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMAD6O43541 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.98■□□□□ 0.63
SMAD6O43541 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.98■□□□□ 0.63
SMAD6O43541 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.98■□□□□ 0.63
SMAD6O43541 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.98■□□□□ 0.63
SMAD6O43541 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMAD6O43541 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMAD6O43541 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.98■□□□□ 0.63
SMAD6O43541 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.98■□□□□ 0.63
SMAD6O43541 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMAD6O43541 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMAD6O43541 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD6O43541 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD6O43541 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD6O43541 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD6O43541 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD6O43541 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.97■□□□□ 0.63
SMAD6O43541 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.97■□□□□ 0.63
SMAD6O43541 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD6O43541 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD6O43541 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SMAD6O43541 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.97■□□□□ 0.63
SMAD6O43541 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.97■□□□□ 0.63
SMAD6O43541 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.97■□□□□ 0.63
SMAD6O43541 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.97■□□□□ 0.63
SMAD6O43541 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD6O43541 AC087388.1-201ENST00000571370 1112 ntBASIC18.97■□□□□ 0.63
SMAD6O43541 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.97■□□□□ 0.63
SMAD6O43541 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.97■□□□□ 0.63
SMAD6O43541 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD6O43541 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.97■□□□□ 0.63
SMAD6O43541 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SMAD6O43541 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.97■□□□□ 0.63
SMAD6O43541 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SMAD6O43541 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD6O43541 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD6O43541 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.97■□□□□ 0.63
SMAD6O43541 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD6O43541 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMAD6O43541 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD6O43541 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD6O43541 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.96■□□□□ 0.63
SMAD6O43541 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD6O43541 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD6O43541 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD6O43541 MTMR9LP-203ENST00000426597 1545 ntBASIC18.96■□□□□ 0.63
SMAD6O43541 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.96■□□□□ 0.63
SMAD6O43541 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD6O43541 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.96■□□□□ 0.63
SMAD6O43541 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD6O43541 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.96■□□□□ 0.63
SMAD6O43541 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD6O43541 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SMAD6O43541 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD6O43541 HOMER2P1-201ENST00000455653 964 ntBASIC18.96■□□□□ 0.63
SMAD6O43541 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.96■□□□□ 0.63
SMAD6O43541 SEC1P-202ENST00000473944 940 ntBASIC18.96■□□□□ 0.63
SMAD6O43541 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.96■□□□□ 0.63
SMAD6O43541 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.96■□□□□ 0.63
SMAD6O43541 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.96■□□□□ 0.63
SMAD6O43541 LINC01238-205ENST00000567549 1107 ntBASIC18.96■□□□□ 0.63
SMAD6O43541 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.96■□□□□ 0.63
SMAD6O43541 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.96■□□□□ 0.63
SMAD6O43541 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.96■□□□□ 0.63
SMAD6O43541 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.96■□□□□ 0.63
SMAD6O43541 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SMAD6O43541 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD6O43541 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD6O43541 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SMAD6O43541 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD6O43541 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD6O43541 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD6O43541 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD6O43541 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD6O43541 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD6O43541 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMAD6O43541 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.96■□□□□ 0.63
SMAD6O43541 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SMAD6O43541 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms