Protein–RNA interactions for Protein: A2RUT3

TMEM89, Transmembrane protein 89, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM89A2RUT3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM89A2RUT3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM89A2RUT3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.92□□□□□ -0.02
TMEM89A2RUT3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 DRAXINP1-201ENST00000437611 948 ntBASIC14.92□□□□□ -0.02
TMEM89A2RUT3 AC079781.3-201ENST00000449110 356 ntBASIC14.92□□□□□ -0.02
TMEM89A2RUT3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM89A2RUT3 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.91□□□□□ -0.02
TMEM89A2RUT3 Z82202.1-201ENST00000623446 1880 ntBASIC14.91□□□□□ -0.02
TMEM89A2RUT3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 AC024243.1-201ENST00000609234 778 ntBASIC14.91□□□□□ -0.02
TMEM89A2RUT3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 AIRN-201ENST00000601203 4374 ntBASIC14.91□□□□□ -0.02
TMEM89A2RUT3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TMEM89A2RUT3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 HLA-F-220ENST00000434407 884 ntBASIC14.9□□□□□ -0.02
TMEM89A2RUT3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 KRT18P31-201ENST00000506277 1292 ntBASIC14.9□□□□□ -0.02
TMEM89A2RUT3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 AP000867.3-201ENST00000524675 377 ntBASIC14.9□□□□□ -0.02
TMEM89A2RUT3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 AP002469.2-201ENST00000531724 424 ntBASIC14.9□□□□□ -0.02
TMEM89A2RUT3 TPSP2-201ENST00000561760 610 ntBASIC14.9□□□□□ -0.02
TMEM89A2RUT3 AC012615.1-201ENST00000565797 1299 ntBASIC14.9□□□□□ -0.02
TMEM89A2RUT3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM89A2RUT3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms