Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 AC097488.1-201ENST00000507834 756 ntBASIC18.78■□□□□ 0.6
TREX1Q9NSU2 AC008550.1-201ENST00000511500 884 ntBASIC18.78■□□□□ 0.6
TREX1Q9NSU2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 AL109659.2-201ENST00000606809 1674 ntBASIC18.78■□□□□ 0.6
TREX1Q9NSU2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 AL355355.2-201ENST00000442321 338 ntBASIC18.77■□□□□ 0.6
TREX1Q9NSU2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.77■□□□□ 0.6
TREX1Q9NSU2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.77■□□□□ 0.59
TREX1Q9NSU2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TREX1Q9NSU2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.77■□□□□ 0.59
TREX1Q9NSU2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.76■□□□□ 0.59
TREX1Q9NSU2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 AC135050.7-201ENST00000624508 2218 ntBASIC18.76■□□□□ 0.59
TREX1Q9NSU2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 CA15P1-201ENST00000481698 905 ntBASIC18.76■□□□□ 0.59
TREX1Q9NSU2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.76■□□□□ 0.59
TREX1Q9NSU2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TREX1Q9NSU2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.75■□□□□ 0.59
TREX1Q9NSU2 BICD1-207ENST00000551848 1962 ntBASIC18.75■□□□□ 0.59
TREX1Q9NSU2 KRT8P45-201ENST00000414328 1447 ntBASIC18.75■□□□□ 0.59
TREX1Q9NSU2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.75■□□□□ 0.59
TREX1Q9NSU2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TREX1Q9NSU2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TREX1Q9NSU2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.75■□□□□ 0.59
TREX1Q9NSU2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TREX1Q9NSU2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TREX1Q9NSU2 AC008556.1-201ENST00000610908 2040 ntBASIC18.75■□□□□ 0.59
TREX1Q9NSU2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TREX1Q9NSU2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TREX1Q9NSU2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TREX1Q9NSU2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TREX1Q9NSU2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.75■□□□□ 0.59
TREX1Q9NSU2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TREX1Q9NSU2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.75■□□□□ 0.59
TREX1Q9NSU2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.75■□□□□ 0.59
TREX1Q9NSU2 AP003071.4-201ENST00000562276 1284 ntBASIC18.75■□□□□ 0.59
TREX1Q9NSU2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms