Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC28Q86X40 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LRRC28Q86X40 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC28Q86X40 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC28Q86X40 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC28Q86X40 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC28Q86X40 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC28Q86X40 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC28Q86X40 GCSHP5-201ENST00000443090 522 ntBASIC16.75■□□□□ 0.27
LRRC28Q86X40 AC098590.1-201ENST00000468126 897 ntBASIC16.75■□□□□ 0.27
LRRC28Q86X40 AC142381.4-202ENST00000563973 229 ntBASIC16.75■□□□□ 0.27
LRRC28Q86X40 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC28Q86X40 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LRRC28Q86X40 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC28Q86X40 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRC28Q86X40 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC28Q86X40 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC28Q86X40 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC28Q86X40 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC28Q86X40 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC28Q86X40 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LRRC28Q86X40 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC28Q86X40 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC28Q86X40 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LRRC28Q86X40 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRC28Q86X40 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC28Q86X40 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC28Q86X40 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC28Q86X40 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC28Q86X40 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC28Q86X40 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC28Q86X40 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC28Q86X40 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC28Q86X40 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC28Q86X40 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC28Q86X40 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC28Q86X40 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC28Q86X40 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC28Q86X40 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
LRRC28Q86X40 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC28Q86X40 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC28Q86X40 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC28Q86X40 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LRRC28Q86X40 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
LRRC28Q86X40 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC28Q86X40 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC28Q86X40 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC28Q86X40 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC28Q86X40 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC28Q86X40 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRRC28Q86X40 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC28Q86X40 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC28Q86X40 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC28Q86X40 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC28Q86X40 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
LRRC28Q86X40 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
LRRC28Q86X40 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC28Q86X40 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.73■□□□□ 0.27
LRRC28Q86X40 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LRRC28Q86X40 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC28Q86X40 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC28Q86X40 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC28Q86X40 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC28Q86X40 AC233263.1-201ENST00000578059 224 ntBASIC16.73■□□□□ 0.27
LRRC28Q86X40 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
LRRC28Q86X40 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
LRRC28Q86X40 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.73■□□□□ 0.27
LRRC28Q86X40 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC28Q86X40 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC28Q86X40 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
LRRC28Q86X40 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC28Q86X40 ZNF815P-204ENST00000434898 1737 ntBASIC16.73■□□□□ 0.27
LRRC28Q86X40 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC28Q86X40 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC28Q86X40 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC28Q86X40 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
LRRC28Q86X40 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC28Q86X40 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC28Q86X40 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRC28Q86X40 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms