Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
UBL3O95164 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
UBL3O95164 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
UBL3O95164 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
UBL3O95164 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL3O95164 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL3O95164 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
UBL3O95164 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL3O95164 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.89■□□□□ 0.29
UBL3O95164 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL3O95164 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL3O95164 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL3O95164 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.89■□□□□ 0.29
UBL3O95164 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBL3O95164 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
UBL3O95164 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.89■□□□□ 0.29
UBL3O95164 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.89■□□□□ 0.29
UBL3O95164 AL160286.2-201ENST00000567150 934 ntBASIC16.89■□□□□ 0.29
UBL3O95164 AC233702.5-201ENST00000584107 538 ntBASIC16.89■□□□□ 0.29
UBL3O95164 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.89■□□□□ 0.29
UBL3O95164 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.89■□□□□ 0.29
UBL3O95164 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL3O95164 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBL3O95164 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.89■□□□□ 0.29
UBL3O95164 HCG11-201ENST00000411553 5696 ntBASIC16.89■□□□□ 0.29
UBL3O95164 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
UBL3O95164 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL3O95164 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBL3O95164 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
UBL3O95164 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
UBL3O95164 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
UBL3O95164 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
UBL3O95164 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL3O95164 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL3O95164 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL3O95164 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL3O95164 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.88■□□□□ 0.29
UBL3O95164 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL3O95164 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
UBL3O95164 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
UBL3O95164 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
UBL3O95164 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL3O95164 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL3O95164 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.88■□□□□ 0.29
UBL3O95164 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
UBL3O95164 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.88■□□□□ 0.29
UBL3O95164 NOC2LP1-202ENST00000452600 2235 ntBASIC16.88■□□□□ 0.29
UBL3O95164 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.88■□□□□ 0.29
UBL3O95164 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.88■□□□□ 0.29
UBL3O95164 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL3O95164 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL3O95164 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.88■□□□□ 0.29
UBL3O95164 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.88■□□□□ 0.29
UBL3O95164 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.88■□□□□ 0.29
UBL3O95164 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.88■□□□□ 0.29
UBL3O95164 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.88■□□□□ 0.29
UBL3O95164 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.88■□□□□ 0.29
UBL3O95164 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.88■□□□□ 0.29
UBL3O95164 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL3O95164 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
UBL3O95164 AL354751.1-201ENST00000412768 1863 ntBASIC16.88■□□□□ 0.29
UBL3O95164 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL3O95164 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL3O95164 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.88■□□□□ 0.29
UBL3O95164 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL3O95164 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL3O95164 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.88■□□□□ 0.29
UBL3O95164 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL3O95164 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL3O95164 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL3O95164 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL3O95164 AP000997.3-201ENST00000623333 2250 ntBASIC16.87■□□□□ 0.29
UBL3O95164 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL3O95164 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.87■□□□□ 0.29
UBL3O95164 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL3O95164 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.87■□□□□ 0.29
UBL3O95164 AL031598.1-201ENST00000561511 1773 ntBASIC16.87■□□□□ 0.29
UBL3O95164 AC104417.2-201ENST00000562989 1793 ntBASIC16.87■□□□□ 0.29
UBL3O95164 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBL3O95164 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBL3O95164 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL3O95164 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.87■□□□□ 0.29
UBL3O95164 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL3O95164 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.87■□□□□ 0.29
UBL3O95164 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBL3O95164 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
UBL3O95164 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.87■□□□□ 0.29
UBL3O95164 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.87■□□□□ 0.29
UBL3O95164 RPS2P4-201ENST00000476944 856 ntBASIC16.87■□□□□ 0.29
UBL3O95164 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
UBL3O95164 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBL3O95164 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.87■□□□□ 0.29
UBL3O95164 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.87■□□□□ 0.29
UBL3O95164 CR392000.1-201ENST00000624770 1228 ntBASIC16.87■□□□□ 0.29
UBL3O95164 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBL3O95164 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
UBL3O95164 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL3O95164 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL3O95164 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.87■□□□□ 0.29
UBL3O95164 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms