Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NKX2-2O95096 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.38■□□□□ 0.37
NKX2-2O95096 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.38■□□□□ 0.37
NKX2-2O95096 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX2-2O95096 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX2-2O95096 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.38■□□□□ 0.37
NKX2-2O95096 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX2-2O95096 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.38■□□□□ 0.37
NKX2-2O95096 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX2-2O95096 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NKX2-2O95096 AL357033.4-201ENST00000617703 1807 ntBASIC17.37■□□□□ 0.37
NKX2-2O95096 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX2-2O95096 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX2-2O95096 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX2-2O95096 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NKX2-2O95096 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX2-2O95096 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NKX2-2O95096 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NKX2-2O95096 GPAT2P1-201ENST00000444924 1672 ntBASIC17.37■□□□□ 0.37
NKX2-2O95096 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX2-2O95096 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.37■□□□□ 0.37
NKX2-2O95096 AL596275.1-201ENST00000423464 877 ntBASIC17.37■□□□□ 0.37
NKX2-2O95096 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.37■□□□□ 0.37
NKX2-2O95096 TSPY15P-201ENST00000457163 923 ntBASIC17.37■□□□□ 0.37
NKX2-2O95096 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX2-2O95096 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.37■□□□□ 0.37
NKX2-2O95096 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX2-2O95096 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NKX2-2O95096 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX2-2O95096 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.37■□□□□ 0.37
NKX2-2O95096 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.37■□□□□ 0.37
NKX2-2O95096 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NKX2-2O95096 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NKX2-2O95096 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX2-2O95096 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX2-2O95096 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX2-2O95096 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX2-2O95096 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
NKX2-2O95096 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NKX2-2O95096 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.36■□□□□ 0.37
NKX2-2O95096 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX2-2O95096 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.36■□□□□ 0.37
NKX2-2O95096 WIZP1-201ENST00000531444 2299 ntBASIC17.36■□□□□ 0.37
NKX2-2O95096 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
NKX2-2O95096 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX2-2O95096 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.36■□□□□ 0.37
NKX2-2O95096 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.36■□□□□ 0.37
NKX2-2O95096 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NKX2-2O95096 MCCD1P1-208ENST00000445732 328 ntBASIC17.36■□□□□ 0.37
NKX2-2O95096 TSPY17P-201ENST00000450329 467 ntBASIC17.36■□□□□ 0.37
NKX2-2O95096 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.36■□□□□ 0.37
NKX2-2O95096 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.36■□□□□ 0.37
NKX2-2O95096 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NKX2-2O95096 AL353719.1-201ENST00000566847 864 ntBASIC17.36■□□□□ 0.37
NKX2-2O95096 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.36■□□□□ 0.37
NKX2-2O95096 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.36■□□□□ 0.37
NKX2-2O95096 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NKX2-2O95096 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX2-2O95096 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX2-2O95096 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.36■□□□□ 0.37
NKX2-2O95096 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX2-2O95096 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NKX2-2O95096 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NKX2-2O95096 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NKX2-2O95096 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.36■□□□□ 0.37
NKX2-2O95096 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.36■□□□□ 0.37
NKX2-2O95096 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.35■□□□□ 0.37
NKX2-2O95096 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NKX2-2O95096 AC008556.1-201ENST00000610908 2040 ntBASIC17.35■□□□□ 0.37
NKX2-2O95096 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.35■□□□□ 0.37
NKX2-2O95096 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX2-2O95096 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NKX2-2O95096 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX2-2O95096 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX2-2O95096 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.35■□□□□ 0.37
NKX2-2O95096 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.35■□□□□ 0.37
NKX2-2O95096 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NKX2-2O95096 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX2-2O95096 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NKX2-2O95096 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.35■□□□□ 0.37
NKX2-2O95096 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX2-2O95096 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX2-2O95096 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.35■□□□□ 0.37
NKX2-2O95096 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX2-2O95096 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.35■□□□□ 0.37
NKX2-2O95096 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX2-2O95096 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.35■□□□□ 0.37
NKX2-2O95096 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.35■□□□□ 0.37
NKX2-2O95096 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX2-2O95096 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX2-2O95096 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX2-2O95096 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NKX2-2O95096 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX2-2O95096 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
NKX2-2O95096 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.34■□□□□ 0.37
NKX2-2O95096 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.34■□□□□ 0.37
NKX2-2O95096 CCR12P-201ENST00000446203 998 ntBASIC17.34■□□□□ 0.37
NKX2-2O95096 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.34■□□□□ 0.37
NKX2-2O95096 C2orf69P3-201ENST00000565542 1120 ntBASIC17.34■□□□□ 0.37
NKX2-2O95096 AC092338.2-201ENST00000568827 1415 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms