Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SSNA1O43805 AL512631.2-201ENST00000604634 923 ntBASIC16.06■□□□□ 0.16
SSNA1O43805 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSNA1O43805 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSNA1O43805 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSNA1O43805 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSNA1O43805 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSNA1O43805 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.06■□□□□ 0.16
SSNA1O43805 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSNA1O43805 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.06■□□□□ 0.16
SSNA1O43805 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SSNA1O43805 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSNA1O43805 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.06■□□□□ 0.16
SSNA1O43805 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSNA1O43805 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SSNA1O43805 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSNA1O43805 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.05■□□□□ 0.16
SSNA1O43805 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSNA1O43805 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SSNA1O43805 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.05■□□□□ 0.16
SSNA1O43805 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSNA1O43805 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.05■□□□□ 0.16
SSNA1O43805 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
SSNA1O43805 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.05■□□□□ 0.16
SSNA1O43805 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSNA1O43805 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSNA1O43805 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSNA1O43805 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSNA1O43805 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SSNA1O43805 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSNA1O43805 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.05■□□□□ 0.16
SSNA1O43805 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.05■□□□□ 0.16
SSNA1O43805 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SSNA1O43805 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSNA1O43805 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSNA1O43805 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSNA1O43805 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSNA1O43805 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SSNA1O43805 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSNA1O43805 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSNA1O43805 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSNA1O43805 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.05■□□□□ 0.16
SSNA1O43805 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSNA1O43805 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSNA1O43805 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SSNA1O43805 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.04■□□□□ 0.16
SSNA1O43805 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSNA1O43805 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SSNA1O43805 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSNA1O43805 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.04■□□□□ 0.16
SSNA1O43805 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSNA1O43805 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SSNA1O43805 HLA-G-202ENST00000376815 851 ntBASIC16.04■□□□□ 0.16
SSNA1O43805 HLA-G-203ENST00000376818 1127 ntBASIC16.04■□□□□ 0.16
SSNA1O43805 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSNA1O43805 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.04■□□□□ 0.16
SSNA1O43805 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.04■□□□□ 0.16
SSNA1O43805 SLC7A5P2-201ENST00000553010 536 ntBASIC16.04■□□□□ 0.16
SSNA1O43805 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.04■□□□□ 0.16
SSNA1O43805 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSNA1O43805 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SSNA1O43805 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSNA1O43805 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSNA1O43805 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSNA1O43805 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SSNA1O43805 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSNA1O43805 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
SSNA1O43805 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSNA1O43805 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSNA1O43805 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSNA1O43805 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SSNA1O43805 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSNA1O43805 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSNA1O43805 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.03■□□□□ 0.16
SSNA1O43805 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSNA1O43805 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSNA1O43805 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSNA1O43805 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSNA1O43805 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
SSNA1O43805 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
SSNA1O43805 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSNA1O43805 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
SSNA1O43805 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.03■□□□□ 0.16
SSNA1O43805 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSNA1O43805 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSNA1O43805 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.03■□□□□ 0.16
SSNA1O43805 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.03■□□□□ 0.16
SSNA1O43805 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.03■□□□□ 0.16
SSNA1O43805 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSNA1O43805 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSNA1O43805 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSNA1O43805 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSNA1O43805 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSNA1O43805 AD000864.1-201ENST00000624076 2295 ntBASIC16.03■□□□□ 0.16
SSNA1O43805 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.03■□□□□ 0.16
SSNA1O43805 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.03■□□□□ 0.16
SSNA1O43805 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.03■□□□□ 0.16
SSNA1O43805 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.03■□□□□ 0.16
SSNA1O43805 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.03■□□□□ 0.16
SSNA1O43805 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms