Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TIMMDC1Q9NPL8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TIMMDC1Q9NPL8 AC090164.3-201ENST00000610780 2143 ntBASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 BICD1-207ENST00000551848 1962 ntBASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 AC141586.5-201ENST00000624546 2050 ntBASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMMDC1Q9NPL8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 MIR4785-201ENST00000585005 73 ntBASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMMDC1Q9NPL8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 PHGDH-210ENST00000641115 1638 ntBASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 AC018553.1-201ENST00000616682 1458 ntBASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 AP002982.1-201ENST00000492365 877 ntBASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 AF186192.3-201ENST00000583427 947 ntBASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 AC113410.3-201ENST00000623366 203 ntBASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
TIMMDC1Q9NPL8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms