Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB1BQ9H0U4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAB1BQ9H0U4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB1BQ9H0U4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAB1BQ9H0U4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB1BQ9H0U4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB1BQ9H0U4 RNF165-205ENST00000588679 2904 ntBASIC15.97■□□□□ 0.15
RAB1BQ9H0U4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB1BQ9H0U4 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.97■□□□□ 0.15
RAB1BQ9H0U4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 STARP1-201ENST00000397973 869 ntBASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 GCSHP2-201ENST00000560971 527 ntBASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 AL358472.4-201ENST00000633140 710 ntBASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB1BQ9H0U4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAB1BQ9H0U4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAB1BQ9H0U4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 AP000550.4-202ENST00000639755 178 ntBASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB1BQ9H0U4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 AC036111.1-201ENST00000533973 1582 ntBASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB1BQ9H0U4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms