Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 NUDT16P1-203ENST00000513809 620 ntBASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 PRSS44-201ENST00000515154 1146 ntBASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 AP000692.2-201ENST00000608391 879 ntBASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 AC011298.2-201ENST00000617989 482 ntBASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.95■□□□□ 0.3
NHLRC1Q6VVB1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.94■□□□□ 0.3
NHLRC1Q6VVB1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 FSCN1P1-201ENST00000568912 1481 ntBASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 FZD10-202ENST00000539839 3282 ntBASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 AC008550.1-201ENST00000511500 884 ntBASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 CKBP1-201ENST00000565489 1086 ntBASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NHLRC1Q6VVB1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.92■□□□□ 0.3
NHLRC1Q6VVB1 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms