Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC9.48□□□□□ -0.89
LINC01554Q52M75 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC9.48□□□□□ -0.89
LINC01554Q52M75 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC9.48□□□□□ -0.89
LINC01554Q52M75 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC9.48□□□□□ -0.89
LINC01554Q52M75 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC9.48□□□□□ -0.89
LINC01554Q52M75 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 AC010525.1-201ENST00000585559 441 ntBASIC9.48□□□□□ -0.89
LINC01554Q52M75 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC9.48□□□□□ -0.89
LINC01554Q52M75 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
LINC01554Q52M75 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC9.48□□□□□ -0.89
LINC01554Q52M75 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
LINC01554Q52M75 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
LINC01554Q52M75 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC9.48□□□□□ -0.89
LINC01554Q52M75 AC022211.2-201ENST00000585075 2527 ntBASIC9.48□□□□□ -0.89
LINC01554Q52M75 PGR-209ENST00000617858 2816 ntTSL 5 BASIC9.48□□□□□ -0.89
LINC01554Q52M75 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
LINC01554Q52M75 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
LINC01554Q52M75 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC9.48□□□□□ -0.89
LINC01554Q52M75 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC9.48□□□□□ -0.89
LINC01554Q52M75 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC9.48□□□□□ -0.89
LINC01554Q52M75 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC9.48□□□□□ -0.89
LINC01554Q52M75 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC9.48□□□□□ -0.89
LINC01554Q52M75 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LINC01554Q52M75 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC9.47□□□□□ -0.89
LINC01554Q52M75 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 AC003102.1-202ENST00000563394 1796 ntBASIC9.47□□□□□ -0.89
LINC01554Q52M75 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC9.47□□□□□ -0.89
LINC01554Q52M75 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
LINC01554Q52M75 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
LINC01554Q52M75 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC9.47□□□□□ -0.89
LINC01554Q52M75 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC9.47□□□□□ -0.89
LINC01554Q52M75 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC9.47□□□□□ -0.89
LINC01554Q52M75 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC9.47□□□□□ -0.89
LINC01554Q52M75 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC9.47□□□□□ -0.89
LINC01554Q52M75 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC9.47□□□□□ -0.89
LINC01554Q52M75 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
LINC01554Q52M75 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC9.47□□□□□ -0.89
LINC01554Q52M75 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
LINC01554Q52M75 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
LINC01554Q52M75 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC9.47□□□□□ -0.89
LINC01554Q52M75 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC9.47□□□□□ -0.89
LINC01554Q52M75 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
LINC01554Q52M75 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms