Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 RPE-208ENST00000436630 1128 ntTSL 2 BASIC11.52□□□□□ -0.572e-6■■□□□ 11.7
SRSF1Q07955 RPE-214ENST00000452025 779 ntTSL 3 BASIC11.05□□□□□ -0.642e-6■■□□□ 11.7
SRSF1Q07955 ACOX2-209ENST00000475143 426 ntTSL 510.99□□□□□ -0.652e-6■■□□□ 11.7
SRSF1Q07955 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.652e-6■■□□□ 11.7
SRSF1Q07955 FANCA-219ENST00000566133 761 ntTSL 310.94□□□□□ -0.667e-7■■□□□ 11.7
SRSF1Q07955 RPE-209ENST00000438191 426 ntTSL 510.82□□□□□ -0.682e-6■■□□□ 11.7
SRSF1Q07955 AC092279.1-201ENST00000594934 1864 ntTSL 210.79□□□□□ -0.682e-6■■□□□ 11.7
SRSF1Q07955 AC132008.2-201ENST00000453454 956 ntTSL 4 BASIC10.33□□□□□ -0.762e-6■■□□□ 11.7
SRSF1Q07955 NOLC1-205ENST00000476468 844 ntTSL 510.17□□□□□ -0.782e-6■■□□□ 11.7
SRSF1Q07955 RPE-203ENST00000408981 737 ntTSL 510.14□□□□□ -0.792e-6■■□□□ 11.7
SRSF1Q07955 NOLC1-204ENST00000464969 2288 ntTSL 210.14□□□□□ -0.792e-6■■□□□ 11.7
SRSF1Q07955 RPE-210ENST00000438204 796 ntTSL 2 BASIC10.1□□□□□ -0.792e-6■■□□□ 11.7
SRSF1Q07955 RPE-212ENST00000441588 496 ntTSL 410.1□□□□□ -0.792e-6■■□□□ 11.7
SRSF1Q07955 RPE-213ENST00000445268 668 ntTSL 5 BASIC10.1□□□□□ -0.792e-6■■□□□ 11.7
SRSF1Q07955 AC092279.1-202ENST00000597683 1966 ntTSL 2 BASIC9.58□□□□□ -0.882e-6■■□□□ 11.7
SRSF1Q07955 ACOX2-202ENST00000459701 2348 ntTSL 5 BASIC8.86□□□□□ -0.992e-6■■□□□ 11.7
SRSF1Q07955 NOLC1-207ENST00000488254 2441 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -12e-6■■□□□ 11.7
SRSF1Q07955 ZNF443-202ENST00000436821 800 ntTSL 48.45□□□□□ -1.062e-6■■□□□ 11.7
SRSF1Q07955 RPE-207ENST00000435437 858 ntTSL 2 BASIC8.43□□□□□ -1.062e-6■■□□□ 11.7
SRSF1Q07955 RPE-202ENST00000359429 2569 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.072e-6■■□□□ 11.7
SRSF1Q07955 RPE-211ENST00000438265 668 ntTSL 38.12□□□□□ -1.112e-6■■□□□ 11.7
SRSF1Q07955 STK36-213ENST00000473681 546 ntTSL 58.12□□□□□ -1.112e-7■■□□□ 11.7
SRSF1Q07955 CHD6-209ENST00000482596 599 ntTSL 1 (best)8.03□□□□□ -1.122e-6■■□□□ 11.7
SRSF1Q07955 RPE-206ENST00000429921 2511 ntTSL 1 (best) BASIC7.97□□□□□ -1.132e-6■■□□□ 11.7
SRSF1Q07955 ZNF443-201ENST00000301547 2663 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.172e-6■■□□□ 11.7
SRSF1Q07955 RPE-205ENST00000429907 925 ntTSL 2 BASIC7.46□□□□□ -1.222e-6■■□□□ 11.7
SRSF1Q07955 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC7.42□□□□□ -1.222e-6■■□□□ 11.7
SRSF1Q07955 RPE-201ENST00000354506 3165 ntTSL 2 BASIC7.28□□□□□ -1.242e-6■■□□□ 11.7
SRSF1Q07955 NOLC1-208ENST00000603946 3217 ntTSL 1 (best)7.11□□□□□ -1.272e-6■■□□□ 11.7
SRSF1Q07955 RPE-216ENST00000454822 2130 ntTSL 2 BASIC6.96□□□□□ -1.32e-6■■□□□ 11.7
SRSF1Q07955 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC6.79□□□□□ -1.322e-6■■□□□ 11.7
SRSF1Q07955 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.362e-6■■□□□ 11.7
SRSF1Q07955 NOLC1-201ENST00000370007 3727 ntTSL 1 (best)5.89□□□□□ -1.472e-6■■□□□ 11.7
SRSF1Q07955 RPE-215ENST00000453724 546 ntTSL 55.83□□□□□ -1.482e-6■■□□□ 11.7
SRSF1Q07955 NOLC1-203ENST00000461421 777 ntTSL 35.76□□□□□ -1.492e-6■■□□□ 11.7
SRSF1Q07955 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.542e-6■■□□□ 11.7
SRSF1Q07955 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.2□□□□□ -1.582e-6■■□□□ 11.7
SRSF1Q07955 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC4.81□□□□□ -1.642e-6■■□□□ 11.7
SRSF1Q07955 CHD6-206ENST00000470470 1349 ntTSL 54.74□□□□□ -1.652e-6■■□□□ 11.7
SRSF1Q07955 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.032e-6■■□□□ 11.7
SRSF1Q07955 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.192e-6■■□□□ 11.7
SRSF1Q07955 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.45□□□□□ -1.382e-6■■□□□ 11.7
SRSF1Q07955 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.412e-6■■□□□ 11.7
SRSF1Q07955 TARDBP-208ENST00000477447 409 ntTSL 53.6□□□□□ -1.834e-7■■□□□ 11.7
SRSF1Q07955 HSP90B1-202ENST00000540297 590 ntTSL 318.36■□□□□ 0.535e-10■■□□□ 11.7
SRSF1Q07955 HSP90B1-205ENST00000549334 581 ntTSL 416.42■□□□□ 0.225e-10■■□□□ 11.7
SRSF1Q07955 FRRS1-203ENST00000489209 216 ntTSL 53.52□□□□□ -1.853e-7■■□□□ 11.7
SRSF1Q07955 CIRBP-205ENST00000585913 833 ntTSL 320.51■□□□□ 0.871e-11■■□□□ 11.7
SRSF1Q07955 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.841e-11■■□□□ 11.7
SRSF1Q07955 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.651e-11■■□□□ 11.7
SRSF1Q07955 CIRBP-232ENST00000591376 830 ntTSL 317.75■□□□□ 0.431e-11■■□□□ 11.7
SRSF1Q07955 CIRBP-237ENST00000592234 571 ntTSL 517.75■□□□□ 0.431e-11■■□□□ 11.7
SRSF1Q07955 CIRBP-210ENST00000586636 938 ntTSL 217.75■□□□□ 0.431e-11■■□□□ 11.7
SRSF1Q07955 CIRBP-206ENST00000585914 1052 ntTSL 516.81■□□□□ 0.281e-11■■□□□ 11.7
SRSF1Q07955 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.251e-11■■□□□ 11.7
SRSF1Q07955 CIRBP-212ENST00000587169 3028 ntTSL 212.83□□□□□ -0.351e-11■■□□□ 11.7
SRSF1Q07955 CIRBP-228ENST00000590347 3117 ntTSL 211.8□□□□□ -0.521e-11■■□□□ 11.7
SRSF1Q07955 CIRBP-242ENST00000593093 3528 ntTSL 211.04□□□□□ -0.641e-11■■□□□ 11.7
SRSF1Q07955 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.436e-9■■□□□ 11.7
SRSF1Q07955 GUK1-214ENST00000460224 639 ntTSL 514.57□□□□□ -0.081e-7■■□□□ 11.7
SRSF1Q07955 GUK1-211ENST00000412265 1012 ntTSL 513.3□□□□□ -0.281e-7■■□□□ 11.7
SRSF1Q07955 GUK1-228ENST00000485168 737 ntTSL 316.19■□□□□ 0.183e-10■■□□□ 11.6
SRSF1Q07955 GUK1-231ENST00000485859 325 ntTSL 1 (best)15.94■□□□□ 0.143e-10■■□□□ 11.6
SRSF1Q07955 GUK1-223ENST00000478725 414 ntTSL 312.97□□□□□ -0.333e-10■■□□□ 11.6
SRSF1Q07955 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.253e-8■■□□□ 11.6
SRSF1Q07955 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC9.55□□□□□ -0.883e-8■■□□□ 11.6
SRSF1Q07955 NKD1-203ENST00000566396 748 ntTSL 313.97□□□□□ -0.173e-8■■□□□ 11.6
SRSF1Q07955 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC10.79□□□□□ -0.683e-7■■□□□ 11.6
SRSF1Q07955 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.543e-7■■□□□ 11.6
SRSF1Q07955 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC11.77□□□□□ -0.527e-9■■□□□ 11.6
SRSF1Q07955 PRC1-201ENST00000361188 4087 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.017e-9■■□□□ 11.6
SRSF1Q07955 PRC1-202ENST00000394249 3034 ntTSL 1 (best) BASIC8.25□□□□□ -1.097e-9■■□□□ 11.6
SRSF1Q07955 MPZL1-207ENST00000465787 1305 ntTSL 1 (best)22.82■■□□□ 1.242e-6■■□□□ 11.6
SRSF1Q07955 MPZL1-205ENST00000448405 1596 ntTSL 1 (best)20.53■□□□□ 0.882e-6■■□□□ 11.6
SRSF1Q07955 MPZL1-206ENST00000464954 607 ntTSL 220.51■□□□□ 0.872e-6■■□□□ 11.6
SRSF1Q07955 FUS-213ENST00000570090 544 ntTSL 218.63■□□□□ 0.571e-17■■□□□ 11.6
SRSF1Q07955 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.532e-6■■□□□ 11.6
SRSF1Q07955 SREBF1-206ENST00000423161 1058 ntTSL 317.9■□□□□ 0.462e-6■■□□□ 11.6
SRSF1Q07955 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.352e-6■■□□□ 11.6
SRSF1Q07955 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.47■□□□□ 0.232e-6■■□□□ 11.6
SRSF1Q07955 UNC45A-215ENST00000557212 1528 ntTSL 216.44■□□□□ 0.222e-6■■□□□ 11.6
SRSF1Q07955 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.41■□□□□ 0.222e-6■■□□□ 11.6
SRSF1Q07955 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.212e-6■■□□□ 11.6
SRSF1Q07955 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.22e-6■■□□□ 11.6
SRSF1Q07955 UNC45A-210ENST00000553671 855 ntTSL 316.27■□□□□ 0.22e-6■■□□□ 11.6
SRSF1Q07955 YY1AP1-218ENST00000454523 810 ntAPPRIS ALT2 TSL 215.79■□□□□ 0.122e-6■■□□□ 11.6
SRSF1Q07955 YY1AP1-221ENST00000476093 1037 ntTSL 315.72■□□□□ 0.112e-6■■□□□ 11.6
SRSF1Q07955 YY1AP1-217ENST00000443231 932 ntAPPRIS ALT2 TSL 315.36■□□□□ 0.052e-6■■□□□ 11.6
SRSF1Q07955 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.012e-6■■□□□ 11.6
SRSF1Q07955 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -02e-6■■□□□ 11.6
SRSF1Q07955 SREBF1-222ENST00000583732 580 ntTSL 414.86□□□□□ -0.032e-6■■□□□ 11.6
SRSF1Q07955 MPZL1-210ENST00000487858 420 ntTSL 414.76□□□□□ -0.052e-6■■□□□ 11.6
SRSF1Q07955 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.74□□□□□ -0.052e-6■■□□□ 11.6
SRSF1Q07955 SREBF1-217ENST00000577897 536 ntTSL 414.27□□□□□ -0.132e-6■■□□□ 11.6
SRSF1Q07955 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.232e-6■■□□□ 11.6
SRSF1Q07955 YY1AP1-220ENST00000476027 927 ntTSL 313.3□□□□□ -0.282e-6■■□□□ 11.6
SRSF1Q07955 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.32e-6■■□□□ 11.6
SRSF1Q07955 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.312e-6■■□□□ 11.6
SRSF1Q07955 AC012254.2-201ENST00000602459 1443 ntAPPRIS ALT2 TSL 512.97□□□□□ -0.331e-6■■□□□ 11.6
SRSF1Q07955 YY1AP1-207ENST00000361140 2701 ntTSL 1 (best)12.65□□□□□ -0.382e-6■■□□□ 11.6
Retrieved 100 of 14,836 protein–RNA pairs in 97.9 ms