RNA–Protein interactions for RNA: ENST00000461421.5

NOLC1-203, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 3

Gene NOLC1, Length 777 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-203ENST00000461421 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
NOLC1-203ENST00000461421 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
NOLC1-203ENST00000461421 PHF23Q9BUL5 403 aaPredicted RBP17.95■□□□□ 0.46
NOLC1-203ENST00000461421 SENP3Q9H4L4 574 aaPredicted RBP17.69■□□□□ 0.42
NOLC1-203ENST00000461421 PLPPR3Q6T4P5 718 aa16.79■□□□□ 0.28
NOLC1-203ENST00000461421 FOXD1Q16676 465 aa16.3■□□□□ 0.2
NOLC1-203ENST00000461421 NISCHQ9Y2I1 1504 aa16.09■□□□□ 0.17
NOLC1-203ENST00000461421 ADRA2BP18089 450 aa15.81■□□□□ 0.12
NOLC1-203ENST00000461421 PPP6R1Q9UPN7 881 aa15.77■□□□□ 0.12
NOLC1-203ENST00000461421 PIAS4Q8N2W9 510 aaPredicted RBP15.48■□□□□ 0.07
NOLC1-203ENST00000461421 MSH5O43196 834 aa15.08■□□□□ 0
NOLC1-203ENST00000461421 PPP4R3CPQ6ZMV5 832 aa14.77□□□□□ -0.05
NOLC1-203ENST00000461421 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
NOLC1-203ENST00000461421 KCNA4P22459 653 aa14.59□□□□□ -0.07
NOLC1-203ENST00000461421 NCBP3Q53F19 620 aaKnown RBP14.55□□□□□ -0.08
NOLC1-203ENST00000461421 CNKSR2Q8WXI2 1034 aa14.36□□□□□ -0.11
NOLC1-203ENST00000461421 MAPK8IP2Q13387 824 aaPredicted RBP14.26□□□□□ -0.13
NOLC1-203ENST00000461421 NPM3O75607 178 aaKnown RBP14.2□□□□□ -0.14
NOLC1-203ENST00000461421 DMRT2Q9Y5R5 561 aa14.1□□□□□ -0.15
NOLC1-203ENST00000461421 RNF216Q9NWF9 866 aaPredicted RBP14.02□□□□□ -0.17
NOLC1-203ENST00000461421 SLC4A1APQ9BWU0 796 aaKnown RBP14□□□□□ -0.17
NOLC1-203ENST00000461421 HOXD11P31277 338 aaPredicted RBP13.88□□□□□ -0.19
NOLC1-203ENST00000461421 CCDC180Q9P1Z9 1646 aa13.83□□□□□ -0.2
NOLC1-203ENST00000461421 DNAJC5BQ9UF47 199 aa13.79□□□□□ -0.2
NOLC1-203ENST00000461421 EHMT2Q96KQ7 1210 aa13.78□□□□□ -0.2
NOLC1-203ENST00000461421 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
NOLC1-203ENST00000461421 DCAF8L1A6NGE4 600 aa13.55□□□□□ -0.24
NOLC1-203ENST00000461421 CSRNP3Q8WYN3 585 aa13.49□□□□□ -0.25
NOLC1-203ENST00000461421 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
NOLC1-203ENST00000461421 DCAF1Q9Y4B6 1507 aa13.41□□□□□ -0.26
NOLC1-203ENST00000461421 ZBTB22O15209 634 aa13.36□□□□□ -0.27
NOLC1-203ENST00000461421 POTEDQ86YR6 584 aa13.36□□□□□ -0.27
NOLC1-203ENST00000461421 SLC4A2P04920 1241 aa13.32□□□□□ -0.28
NOLC1-203ENST00000461421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.3□□□□□ -0.281e-8■■■■□ 20.8
NOLC1-203ENST00000461421 ABCC9O60706 1549 aa13.23□□□□□ -0.29
NOLC1-203ENST00000461421 SHROOM4Q9ULL8 1493 aa13.23□□□□□ -0.29
NOLC1-203ENST00000461421 MYCNP04198 464 aaPredicted RBP13.19□□□□□ -0.3
NOLC1-203ENST00000461421 MYO15BQ96JP2 1530 aa13.14□□□□□ -0.31
NOLC1-203ENST00000461421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.08□□□□□ -0.32
NOLC1-203ENST00000461421 HNRNPUL2Q1KMD3 747 aaKnown RBP13.08□□□□□ -0.32
NOLC1-203ENST00000461421 ATXN8OSP0DMR3 200 aa13.01□□□□□ -0.33
NOLC1-203ENST00000461421 U3KPZ7 1027 aaPredicted RBP13.01□□□□□ -0.33
NOLC1-203ENST00000461421 SAMD1Q6SPF0 538 aaPredicted RBP13□□□□□ -0.33
NOLC1-203ENST00000461421 DCAF8L2P0C7V8 631 aa12.98□□□□□ -0.33
NOLC1-203ENST00000461421 SUPT5HO00267 1087 aaKnown RBP12.96□□□□□ -0.33
NOLC1-203ENST00000461421 APLP2Q06481 763 aa12.95□□□□□ -0.34
NOLC1-203ENST00000461421 RNF39Q9H2S5 420 aa12.86□□□□□ -0.35
NOLC1-203ENST00000461421 NACADO15069 1562 aa12.83□□□□□ -0.36
NOLC1-203ENST00000461421 C1QBPQ07021 282 aaKnown RBP12.78□□□□□ -0.36
NOLC1-203ENST00000461421 RB1CC1Q8TDY2 1594 aa12.73□□□□□ -0.37
NOLC1-203ENST00000461421 ATF5Q9Y2D1 282 aaPredicted RBP12.68□□□□□ -0.38
NOLC1-203ENST00000461421 SCRIBQ14160 1630 aa12.66□□□□□ -0.38
NOLC1-203ENST00000461421 ZNF219Q9P2Y4 722 aaPredicted RBP12.65□□□□□ -0.38
NOLC1-203ENST00000461421 RSF1Q96T23 1441 aaPredicted RBP12.63□□□□□ -0.39
NOLC1-203ENST00000461421 CAPN15O75808 1086 aa12.62□□□□□ -0.39
NOLC1-203ENST00000461421 TRHP20396 242 aaPredicted RBP12.58□□□□□ -0.4
NOLC1-203ENST00000461421 SPINK5Q9NQ38 1064 aaPredicted RBP12.57□□□□□ -0.4
NOLC1-203ENST00000461421 UNC13AQ9UPW8 1703 aa12.53□□□□□ -0.4
NOLC1-203ENST00000461421 CACNB1Q02641 598 aaPredicted RBP12.45□□□□□ -0.42
NOLC1-203ENST00000461421 POLA2Q14181 598 aa12.41□□□□□ -0.42
NOLC1-203ENST00000461421 BAZ1AQ9NRL2 1556 aaPredicted RBP12.41□□□□□ -0.42
NOLC1-203ENST00000461421 CECR2Q9BXF3 1484 aa12.39□□□□□ -0.43
NOLC1-203ENST00000461421 MROH2BQ7Z745 1585 aa12.38□□□□□ -0.43
NOLC1-203ENST00000461421 FBLN2P98095 1184 aa12.34□□□□□ -0.43
NOLC1-203ENST00000461421 PABPN1Q86U42 306 aaKnown RBP eCLIP12.34□□□□□ -0.43
NOLC1-203ENST00000461421 ABCB7O75027 752 aa12.33□□□□□ -0.44
NOLC1-203ENST00000461421 ZBTB12Q9Y330 459 aaPredicted RBP12.33□□□□□ -0.44
NOLC1-203ENST00000461421 BICRAQ9NZM4 1560 aa12.3□□□□□ -0.44
NOLC1-203ENST00000461421 DSG3P32926 999 aa12.29□□□□□ -0.44
NOLC1-203ENST00000461421 FKBP8Q14318 412 aa12.25□□□□□ -0.45
NOLC1-203ENST00000461421 TRIM41Q8WV44 630 aa12.25□□□□□ -0.45
NOLC1-203ENST00000461421 TOP2AP11388 1531 aaKnown RBP12.25□□□□□ -0.45
NOLC1-203ENST00000461421 SMARCA4P51532 1647 aa12.23□□□□□ -0.45
NOLC1-203ENST00000461421 WIZO95785 1651 aa12.22□□□□□ -0.45
NOLC1-203ENST00000461421 EIF4G1Q04637 1599 aaKnown RBP12.18□□□□□ -0.46
NOLC1-203ENST00000461421 MKRN4PQ13434 485 aaPredicted RBP12.16□□□□□ -0.46
NOLC1-203ENST00000461421 PEG3Q9GZU2 1588 aa12.16□□□□□ -0.46
NOLC1-203ENST00000461421 LOC105371045A0A1W2PR82 267 aa12.13□□□□□ -0.47
NOLC1-203ENST00000461421 HRCP23327 699 aa12.12□□□□□ -0.47
NOLC1-203ENST00000461421 SMARCA2P51531 1590 aa12.09□□□□□ -0.47
NOLC1-203ENST00000461421 CCDC88BA6NC98 1476 aa12.09□□□□□ -0.47
NOLC1-203ENST00000461421 SPDYE4A6NLX3 237 aa12.09□□□□□ -0.47
NOLC1-203ENST00000461421 TRIM26Q12899 539 aaPredicted RBP12.06□□□□□ -0.48
NOLC1-203ENST00000461421 PCGF6Q9BYE7 350 aa12.04□□□□□ -0.48
NOLC1-203ENST00000461421 EEA1Q15075 1411 aa12.03□□□□□ -0.48
NOLC1-203ENST00000461421 CC2D2AQ9P2K1 1620 aa12□□□□□ -0.49
NOLC1-203ENST00000461421 ATAD2BQ9ULI0 1458 aa11.98□□□□□ -0.49
NOLC1-203ENST00000461421 OSCARQ8IYS5 282 aa11.95□□□□□ -0.5
NOLC1-203ENST00000461421 SPDYE2BA6NHP3 402 aa11.94□□□□□ -0.5
NOLC1-203ENST00000461421 SPDYE6P0CI01 402 aa11.94□□□□□ -0.5
NOLC1-203ENST00000461421 SPDYE2Q495Y8 402 aa11.94□□□□□ -0.5
NOLC1-203ENST00000461421 ZNF692Q9BU19 519 aaPredicted RBP11.93□□□□□ -0.5
NOLC1-203ENST00000461421 BAZ1BQ9UIG0 1483 aaKnown RBP11.92□□□□□ -0.5
NOLC1-203ENST00000461421 FAM9AQ8IZU1 332 aaPredicted RBP11.9□□□□□ -0.5
NOLC1-203ENST00000461421 ZEB1P37275 1124 aaPredicted RBP11.89□□□□□ -0.51
NOLC1-203ENST00000461421 WRNQ14191 1432 aaPredicted RBP eCLIP11.88□□□□□ -0.51
NOLC1-203ENST00000461421 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
NOLC1-203ENST00000461421 TNIKQ9UKE5 1360 aa11.87□□□□□ -0.51
NOLC1-203ENST00000461421 ABCC8Q09428 1581 aa11.87□□□□□ -0.51
NOLC1-203ENST00000461421 HMGXB3Q12766 1538 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms