RNA–Protein interactions for RNA: ENST00000429907.5

RPE-205, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-205ENST00000429907 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
RPE-205ENST00000429907 CHIC1Q5VXU3 224 aa20.83■□□□□ 0.93
RPE-205ENST00000429907 NISCHQ9Y2I1 1504 aa19.17■□□□□ 0.66
RPE-205ENST00000429907 PHF23Q9BUL5 403 aaPredicted RBP18.4■□□□□ 0.54
RPE-205ENST00000429907 SENP3Q9H4L4 574 aaPredicted RBP17.99■□□□□ 0.47
RPE-205ENST00000429907 CCDC180Q9P1Z9 1646 aa17.22■□□□□ 0.35
RPE-205ENST00000429907 ABCC9O60706 1549 aa17.19■□□□□ 0.34
RPE-205ENST00000429907 PLPPR3Q6T4P5 718 aa16.88■□□□□ 0.29
RPE-205ENST00000429907 FOXD1Q16676 465 aa16.79■□□□□ 0.28
RPE-205ENST00000429907 DNAJC5BQ9UF47 199 aa16.24■□□□□ 0.19
RPE-205ENST00000429907 PPP6R1Q9UPN7 881 aa16.23■□□□□ 0.19
RPE-205ENST00000429907 RB1CC1Q8TDY2 1594 aa16.21■□□□□ 0.19
RPE-205ENST00000429907 ADRA2BP18089 450 aa16.21■□□□□ 0.19
RPE-205ENST00000429907 DCAF8L2P0C7V8 631 aa16.12■□□□□ 0.17
RPE-205ENST00000429907 NACADO15069 1562 aa16.11■□□□□ 0.17
RPE-205ENST00000429907 UNC13AQ9UPW8 1703 aa16.08■□□□□ 0.16
RPE-205ENST00000429907 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
RPE-205ENST00000429907 ZCCHC6Q5VYS8 1495 aaKnown RBP15.95■□□□□ 0.14
RPE-205ENST00000429907 MYO15BQ96JP2 1530 aa15.89■□□□□ 0.13
RPE-205ENST00000429907 PIAS4Q8N2W9 510 aaPredicted RBP15.81■□□□□ 0.12
RPE-205ENST00000429907 DCAF1Q9Y4B6 1507 aa15.81■□□□□ 0.12
RPE-205ENST00000429907 BICRAQ9NZM4 1560 aa15.76■□□□□ 0.11
RPE-205ENST00000429907 SCRIBQ14160 1630 aa15.74■□□□□ 0.11
RPE-205ENST00000429907 CC2D2AQ9P2K1 1620 aa15.46■□□□□ 0.07
RPE-205ENST00000429907 SHROOM4Q9ULL8 1493 aa15.43■□□□□ 0.06
RPE-205ENST00000429907 CECR2Q9BXF3 1484 aa15.41■□□□□ 0.06
RPE-205ENST00000429907 EIF4G1Q04637 1599 aaKnown RBP15.36■□□□□ 0.05
RPE-205ENST00000429907 MSH5O43196 834 aa15.35■□□□□ 0.05
RPE-205ENST00000429907 POTEDQ86YR6 584 aa15.32■□□□□ 0.04
RPE-205ENST00000429907 SMARCA4P51532 1647 aa14.99□□□□□ -0.01
RPE-205ENST00000429907 PPP4R3CPQ6ZMV5 832 aa14.94□□□□□ -0.02
RPE-205ENST00000429907 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
RPE-205ENST00000429907 DNAJC5Q9H3Z4 198 aa14.88□□□□□ -0.03
RPE-205ENST00000429907 SMARCA2P51531 1590 aa14.85□□□□□ -0.03
RPE-205ENST00000429907 ATAD2BQ9ULI0 1458 aa14.82□□□□□ -0.04
RPE-205ENST00000429907 MROH2BQ7Z745 1585 aa14.81□□□□□ -0.04
RPE-205ENST00000429907 HMGXB3Q12766 1538 aa14.79□□□□□ -0.04
RPE-205ENST00000429907 NCAPD3P42695 1498 aa14.78□□□□□ -0.04
RPE-205ENST00000429907 ERCC6Q03468 1493 aa14.78□□□□□ -0.04
RPE-205ENST00000429907 WIZO95785 1651 aa14.76□□□□□ -0.05
RPE-205ENST00000429907 PEG3Q9GZU2 1588 aa14.76□□□□□ -0.05
RPE-205ENST00000429907 BAZ1BQ9UIG0 1483 aaKnown RBP14.76□□□□□ -0.05
RPE-205ENST00000429907 NESP48681 1621 aa14.74□□□□□ -0.05
RPE-205ENST00000429907 MAPK8IP2Q13387 824 aaPredicted RBP14.71□□□□□ -0.05
RPE-205ENST00000429907 CUX2O14529 1486 aa14.7□□□□□ -0.06
RPE-205ENST00000429907 KCNA4P22459 653 aa14.69□□□□□ -0.06
RPE-205ENST00000429907 SCAF1Q9H7N4 1312 aaKnown RBP14.65□□□□□ -0.06
RPE-205ENST00000429907 KIF21AQ7Z4S6 1674 aa14.57□□□□□ -0.08
RPE-205ENST00000429907 THOC2Q8NI27 1593 aaKnown RBP14.56□□□□□ -0.08
RPE-205ENST00000429907 LAMC3Q9Y6N6 1575 aa14.54□□□□□ -0.08
RPE-205ENST00000429907 RSF1Q96T23 1441 aaPredicted RBP14.53□□□□□ -0.08
RPE-205ENST00000429907 TOP2AP11388 1531 aaKnown RBP14.5□□□□□ -0.09
RPE-205ENST00000429907 PRDM2Q13029 1718 aa14.47□□□□□ -0.09
RPE-205ENST00000429907 CNKSR2Q8WXI2 1034 aa14.46□□□□□ -0.09
RPE-205ENST00000429907 NCBP3Q53F19 620 aaKnown RBP14.45□□□□□ -0.1
RPE-205ENST00000429907 DMRT2Q9Y5R5 561 aa14.41□□□□□ -0.1
RPE-205ENST00000429907 NPM3O75607 178 aaKnown RBP14.37□□□□□ -0.11
RPE-205ENST00000429907 PDS5BQ9NTI5 1447 aa14.36□□□□□ -0.11
RPE-205ENST00000429907 CADPSQ9ULU8 1353 aa14.35□□□□□ -0.11
RPE-205ENST00000429907 TRIM41Q8WV44 630 aa14.35□□□□□ -0.11
RPE-205ENST00000429907 MRC2Q9UBG0 1479 aa14.31□□□□□ -0.12
RPE-205ENST00000429907 CCDC88BA6NC98 1476 aa14.28□□□□□ -0.12
RPE-205ENST00000429907 CEP164Q9UPV0 1460 aa14.28□□□□□ -0.12
RPE-205ENST00000429907 FANCD2Q9BXW9 1451 aa14.27□□□□□ -0.12
RPE-205ENST00000429907 WDR62O43379 1518 aa14.26□□□□□ -0.13
RPE-205ENST00000429907 CFTRP13569 1480 aa14.26□□□□□ -0.13
RPE-205ENST00000429907 SUPT5HO00267 1087 aaKnown RBP14.17□□□□□ -0.14
RPE-205ENST00000429907 RNF216Q9NWF9 866 aaPredicted RBP14.16□□□□□ -0.14
RPE-205ENST00000429907 URB2Q14146 1524 aaKnown RBP14.14□□□□□ -0.15
RPE-205ENST00000429907 HOXD11P31277 338 aaPredicted RBP14.12□□□□□ -0.15
RPE-205ENST00000429907 DNMBPQ6XZF7 1577 aa14.05□□□□□ -0.16
RPE-205ENST00000429907 TOPBP1Q92547 1522 aa14.04□□□□□ -0.16
RPE-205ENST00000429907 ZNF608Q9ULD9 1512 aaPredicted RBP14.01□□□□□ -0.17
RPE-205ENST00000429907 OSCARQ8IYS5 282 aa14□□□□□ -0.17
RPE-205ENST00000429907 ABCC8Q09428 1581 aa13.99□□□□□ -0.17
RPE-205ENST00000429907 RIMBP3CA6NJZ7 1639 aa13.97□□□□□ -0.17
RPE-205ENST00000429907 RIMBP3BA6NNM3 1639 aa13.97□□□□□ -0.17
RPE-205ENST00000429907 RIMBP3Q9UFD9 1639 aa13.97□□□□□ -0.17
RPE-205ENST00000429907 EIF4G3O43432 1585 aaKnown RBP13.96□□□□□ -0.18
RPE-205ENST00000429907 IFT140Q96RY7 1462 aa13.94□□□□□ -0.18
RPE-205ENST00000429907 TARBP1Q13395 1621 aaKnown RBP13.94□□□□□ -0.18
RPE-205ENST00000429907 SLC4A1APQ9BWU0 796 aaKnown RBP13.93□□□□□ -0.18
RPE-205ENST00000429907 CHD1O14646 1710 aa13.92□□□□□ -0.18
RPE-205ENST00000429907 CUX1P39880 1505 aa13.9□□□□□ -0.18
RPE-205ENST00000429907 POLA1P09884 1462 aaPredicted RBP13.89□□□□□ -0.19
RPE-205ENST00000429907 FGD5Q6ZNL6 1462 aa13.88□□□□□ -0.19
RPE-205ENST00000429907 WDR97A6NE52 1622 aa13.88□□□□□ -0.19
RPE-205ENST00000429907 ARHGEF11O15085 1522 aa13.88□□□□□ -0.19
RPE-205ENST00000429907 PBRM1Q86U86 1689 aa13.87□□□□□ -0.19
RPE-205ENST00000429907 RAD54L2Q9Y4B4 1467 aa13.86□□□□□ -0.19
RPE-205ENST00000429907 BIVM-ERCC5R4GMW8 1640 aa13.84□□□□□ -0.19
RPE-205ENST00000429907 AQRO60306 1485 aaKnown RBP eCLIP13.84□□□□□ -0.192e-6■■□□□ 13.2
RPE-205ENST00000429907 SOGA1O94964 1423 aa13.81□□□□□ -0.2
RPE-205ENST00000429907 SYNJ1O43426 1573 aa13.81□□□□□ -0.2
RPE-205ENST00000429907 DCAF8L1A6NGE4 600 aa13.8□□□□□ -0.2
RPE-205ENST00000429907 FBLN2P98095 1184 aa13.8□□□□□ -0.2
RPE-205ENST00000429907 CYB5RLQ6IPT4 315 aa13.8□□□□□ -0.2
RPE-205ENST00000429907 TOP2BQ02880 1626 aa13.79□□□□□ -0.2
RPE-205ENST00000429907 ARAP1Q96P48 1450 aa13.76□□□□□ -0.21
RPE-205ENST00000429907 TDRD9Q8NDG6 1382 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms