RNA–Protein interactions for RNA: ENST00000408981.6

RPE-203, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-203ENST00000408981 NISCHQ9Y2I1 1504 aa22.21■■□□□ 1.15
RPE-203ENST00000408981 ABCC9O60706 1549 aa22.07■■□□□ 1.12
RPE-203ENST00000408981 DNAJC5BQ9UF47 199 aa21.98■■□□□ 1.11
RPE-203ENST00000408981 DNAJC5Q9H3Z4 198 aa21.26■□□□□ 0.99
RPE-203ENST00000408981 CCDC180Q9P1Z9 1646 aa20.51■□□□□ 0.87
RPE-203ENST00000408981 PABPN1Q86U42 306 aaKnown RBP eCLIP20.35■□□□□ 0.85
RPE-203ENST00000408981 RB1CC1Q8TDY2 1594 aa20.3■□□□□ 0.84
RPE-203ENST00000408981 CECR2Q9BXF3 1484 aa20.02■□□□□ 0.8
RPE-203ENST00000408981 TRIM41Q8WV44 630 aa19.82■□□□□ 0.76
RPE-203ENST00000408981 CC2D2AQ9P2K1 1620 aa19.8■□□□□ 0.76
RPE-203ENST00000408981 NACADO15069 1562 aa19.78■□□□□ 0.76
RPE-203ENST00000408981 UNC13AQ9UPW8 1703 aa19.73■□□□□ 0.75
RPE-203ENST00000408981 BICRAQ9NZM4 1560 aa19.72■□□□□ 0.75
RPE-203ENST00000408981 CUX2O14529 1486 aa19.58■□□□□ 0.72
RPE-203ENST00000408981 DCAF8L2P0C7V8 631 aa19.56■□□□□ 0.72
RPE-203ENST00000408981 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
RPE-203ENST00000408981 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
RPE-203ENST00000408981 ERCC6Q03468 1493 aa19.18■□□□□ 0.66
RPE-203ENST00000408981 AEBP2Q6ZN18 517 aaPredicted RBP19.08■□□□□ 0.64
RPE-203ENST00000408981 MYO15BQ96JP2 1530 aa18.98■□□□□ 0.63
RPE-203ENST00000408981 SCRIBQ14160 1630 aa18.74■□□□□ 0.59
RPE-203ENST00000408981 THOC2Q8NI27 1593 aaKnown RBP18.56■□□□□ 0.56
RPE-203ENST00000408981 NESP48681 1621 aa18.52■□□□□ 0.55
RPE-203ENST00000408981 TRHP20396 242 aaPredicted RBP18.51■□□□□ 0.55
RPE-203ENST00000408981 ILDR1Q86SU0 546 aaPredicted RBP18.51■□□□□ 0.55
RPE-203ENST00000408981 OSCARQ8IYS5 282 aa18.5■□□□□ 0.55
RPE-203ENST00000408981 BAZ1AQ9NRL2 1556 aaPredicted RBP18.4■□□□□ 0.54
RPE-203ENST00000408981 SMARCA2P51531 1590 aa18.38■□□□□ 0.53
RPE-203ENST00000408981 RIMBP3CA6NJZ7 1639 aa18.35■□□□□ 0.53
RPE-203ENST00000408981 RIMBP3BA6NNM3 1639 aa18.35■□□□□ 0.53
RPE-203ENST00000408981 RIMBP3Q9UFD9 1639 aa18.35■□□□□ 0.53
RPE-203ENST00000408981 NCAPD3P42695 1498 aa18.29■□□□□ 0.52
RPE-203ENST00000408981 DCAF1Q9Y4B6 1507 aa18.21■□□□□ 0.51
RPE-203ENST00000408981 CYB5RLQ6IPT4 315 aa18.2■□□□□ 0.5
RPE-203ENST00000408981 KIF21AQ7Z4S6 1674 aa18.16■□□□□ 0.5
RPE-203ENST00000408981 ARHGEF11O15085 1522 aa18.16■□□□□ 0.5
RPE-203ENST00000408981 PDS5BQ9NTI5 1447 aa18.11■□□□□ 0.49
RPE-203ENST00000408981 LAMC3Q9Y6N6 1575 aa18.1■□□□□ 0.49
RPE-203ENST00000408981 ZCCHC6Q5VYS8 1495 aaKnown RBP18.08■□□□□ 0.49
RPE-203ENST00000408981 ATAD2BQ9ULI0 1458 aa18.05■□□□□ 0.48
RPE-203ENST00000408981 MRC2Q9UBG0 1479 aa18.02■□□□□ 0.48
RPE-203ENST00000408981 HMGXB3Q12766 1538 aa18■□□□□ 0.47
RPE-203ENST00000408981 WDR62O43379 1518 aa17.99■□□□□ 0.47
RPE-203ENST00000408981 ARAP1Q96P48 1450 aa17.88■□□□□ 0.45
RPE-203ENST00000408981 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
RPE-203ENST00000408981 CADPSQ9ULU8 1353 aa17.7■□□□□ 0.42
RPE-203ENST00000408981 CEP164Q9UPV0 1460 aa17.67■□□□□ 0.42
RPE-203ENST00000408981 SMARCA4P51532 1647 aa17.63■□□□□ 0.41
RPE-203ENST00000408981 RSF1Q96T23 1441 aaPredicted RBP17.59■□□□□ 0.41
RPE-203ENST00000408981 FANCD2Q9BXW9 1451 aa17.51■□□□□ 0.39
RPE-203ENST00000408981 KDM4FA0A1W2PPD8 638 aa17.51■□□□□ 0.39
RPE-203ENST00000408981 LMTK3Q96Q04 1460 aa17.5■□□□□ 0.39
RPE-203ENST00000408981 ZNF608Q9ULD9 1512 aaPredicted RBP17.48■□□□□ 0.39
RPE-203ENST00000408981 FBXO41Q8TF61 875 aa17.47■□□□□ 0.39
RPE-203ENST00000408981 URB2Q14146 1524 aaKnown RBP17.44■□□□□ 0.38
RPE-203ENST00000408981 FBLN2P98095 1184 aa17.43■□□□□ 0.38
RPE-203ENST00000408981 PEG3Q9GZU2 1588 aa17.42■□□□□ 0.38
RPE-203ENST00000408981 SOCS7O14512 581 aa17.41■□□□□ 0.38
RPE-203ENST00000408981 CHIC1Q5VXU3 224 aa17.41■□□□□ 0.38
RPE-203ENST00000408981 CHD1O14646 1710 aa17.41■□□□□ 0.38
RPE-203ENST00000408981 ERCC6L2Q5T890 1561 aa17.36■□□□□ 0.37
RPE-203ENST00000408981 IFT140Q96RY7 1462 aa17.36■□□□□ 0.37
RPE-203ENST00000408981 EIF4G3O43432 1585 aaKnown RBP17.28■□□□□ 0.36
RPE-203ENST00000408981 HECW2Q9P2P5 1572 aa17.24■□□□□ 0.35
RPE-203ENST00000408981 ILDR2Q71H61 639 aa17.24■□□□□ 0.35
RPE-203ENST00000408981 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
RPE-203ENST00000408981 CLASP1Q7Z460 1538 aa17.18■□□□□ 0.34
RPE-203ENST00000408981 CFTRP13569 1480 aa17.17■□□□□ 0.34
RPE-203ENST00000408981 AQRO60306 1485 aaKnown RBP eCLIP17.16■□□□□ 0.342e-6■■□□□ 13.2
RPE-203ENST00000408981 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
RPE-203ENST00000408981 DISP3Q9P2K9 1392 aa17.11■□□□□ 0.33
RPE-203ENST00000408981 KIF13AQ9H1H9 1805 aa17.07■□□□□ 0.32
RPE-203ENST00000408981 SYNJ1O43426 1573 aa17.07■□□□□ 0.32
RPE-203ENST00000408981 SYNJ2O15056 1496 aa17.07■□□□□ 0.32
RPE-203ENST00000408981 ADGRL1O94910 1474 aa17.03■□□□□ 0.32
RPE-203ENST00000408981 CHMP7Q8WUX9 453 aaPredicted RBP17.02■□□□□ 0.32
RPE-203ENST00000408981 KDM6BO15054 1643 aa17.02■□□□□ 0.31
RPE-203ENST00000408981 TOPBP1Q92547 1522 aa17■□□□□ 0.31
RPE-203ENST00000408981 FAM69CQ0P6D2 419 aa16.98■□□□□ 0.31
RPE-203ENST00000408981 SNAPC4Q5SXM2 1469 aa16.93■□□□□ 0.3
RPE-203ENST00000408981 TARBP1Q13395 1621 aaKnown RBP16.92■□□□□ 0.3
RPE-203ENST00000408981 ABCC10Q5T3U5 1492 aa16.86■□□□□ 0.29
RPE-203ENST00000408981 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
RPE-203ENST00000408981 TDRD9Q8NDG6 1382 aaKnown RBP16.84■□□□□ 0.29
RPE-203ENST00000408981 WIZO95785 1651 aa16.82■□□□□ 0.28
RPE-203ENST00000408981 MAGI1Q96QZ7 1491 aaPredicted RBP16.8■□□□□ 0.28
RPE-203ENST00000408981 DNMBPQ6XZF7 1577 aa16.79■□□□□ 0.28
RPE-203ENST00000408981 PRDM2Q13029 1718 aa16.77■□□□□ 0.28
RPE-203ENST00000408981 DIP2BQ9P265 1576 aa16.74■□□□□ 0.27
RPE-203ENST00000408981 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
RPE-203ENST00000408981 SPATA31D1Q6ZQQ2 1576 aa16.73■□□□□ 0.27
RPE-203ENST00000408981 RAD54L2Q9Y4B4 1467 aa16.73■□□□□ 0.27
RPE-203ENST00000408981 NPM1P06748 294 aaKnown RBP eCLIP16.71■□□□□ 0.27
RPE-203ENST00000408981 TSPOAP1O95153 1857 aa16.7■□□□□ 0.26
RPE-203ENST00000408981 GRIN2BQ13224 1484 aa16.67■□□□□ 0.26
RPE-203ENST00000408981 SOGA1O94964 1423 aa16.67■□□□□ 0.26
RPE-203ENST00000408981 CEP170Q5SW79 1584 aa16.65■□□□□ 0.26
RPE-203ENST00000408981 MAPKBP1O60336 1514 aa16.65■□□□□ 0.26
RPE-203ENST00000408981 WDR97A6NE52 1622 aa16.62■□□□□ 0.25
RPE-203ENST00000408981 CERKQ8TCT0 537 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms