RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 NISCHQ9Y2I1 1504 aa24.55■■□□□ 1.52
RPE-209ENST00000438191 ABCC9O60706 1549 aa23.83■■□□□ 1.41
RPE-209ENST00000438191 DNAJC5BQ9UF47 199 aa23.55■■□□□ 1.36
RPE-209ENST00000438191 CCDC180Q9P1Z9 1646 aa22.6■■□□□ 1.21
RPE-209ENST00000438191 DNAJC5Q9H3Z4 198 aa22.54■■□□□ 1.2
RPE-209ENST00000438191 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
RPE-209ENST00000438191 PABPN1Q86U42 306 aaKnown RBP eCLIP21.96■■□□□ 1.11
RPE-209ENST00000438191 UNC13AQ9UPW8 1703 aa21.68■■□□□ 1.06
RPE-209ENST00000438191 NACADO15069 1562 aa21.65■■□□□ 1.06
RPE-209ENST00000438191 CECR2Q9BXF3 1484 aa21.6■■□□□ 1.05
RPE-209ENST00000438191 BICRAQ9NZM4 1560 aa21.57■■□□□ 1.04
RPE-209ENST00000438191 CC2D2AQ9P2K1 1620 aa21.48■■□□□ 1.03
RPE-209ENST00000438191 DCAF8L2P0C7V8 631 aa21.19■□□□□ 0.98
RPE-209ENST00000438191 EIF4G1Q04637 1599 aaKnown RBP21.11■□□□□ 0.97
RPE-209ENST00000438191 SHROOM4Q9ULL8 1493 aa21.09■□□□□ 0.97
RPE-209ENST00000438191 CUX2O14529 1486 aa21.07■□□□□ 0.96
RPE-209ENST00000438191 TRIM41Q8WV44 630 aa20.96■□□□□ 0.95
RPE-209ENST00000438191 MYO15BQ96JP2 1530 aa20.94■□□□□ 0.94
RPE-209ENST00000438191 ERCC6Q03468 1493 aa20.62■□□□□ 0.89
RPE-209ENST00000438191 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
RPE-209ENST00000438191 DCAF1Q9Y4B6 1507 aa20.2■□□□□ 0.82
RPE-209ENST00000438191 THOC2Q8NI27 1593 aaKnown RBP20.2■□□□□ 0.82
RPE-209ENST00000438191 NESP48681 1621 aa20.12■□□□□ 0.81
RPE-209ENST00000438191 ZCCHC6Q5VYS8 1495 aaKnown RBP20.06■□□□□ 0.8
RPE-209ENST00000438191 AEBP2Q6ZN18 517 aaPredicted RBP20.04■□□□□ 0.8
RPE-209ENST00000438191 NCAPD3P42695 1498 aa20.02■□□□□ 0.8
RPE-209ENST00000438191 SMARCA2P51531 1590 aa19.91■□□□□ 0.78
RPE-209ENST00000438191 BAZ1AQ9NRL2 1556 aaPredicted RBP19.91■□□□□ 0.78
RPE-209ENST00000438191 OSCARQ8IYS5 282 aa19.86■□□□□ 0.77
RPE-209ENST00000438191 KIF21AQ7Z4S6 1674 aa19.84■□□□□ 0.77
RPE-209ENST00000438191 RIMBP3CA6NJZ7 1639 aa19.8■□□□□ 0.76
RPE-209ENST00000438191 RIMBP3BA6NNM3 1639 aa19.8■□□□□ 0.76
RPE-209ENST00000438191 RIMBP3Q9UFD9 1639 aa19.8■□□□□ 0.76
RPE-209ENST00000438191 ATAD2BQ9ULI0 1458 aa19.77■□□□□ 0.76
RPE-209ENST00000438191 LAMC3Q9Y6N6 1575 aa19.77■□□□□ 0.76
RPE-209ENST00000438191 HMGXB3Q12766 1538 aa19.75■□□□□ 0.75
RPE-209ENST00000438191 TRHP20396 242 aaPredicted RBP19.67■□□□□ 0.74
RPE-209ENST00000438191 PDS5BQ9NTI5 1447 aa19.67■□□□□ 0.74
RPE-209ENST00000438191 WDR62O43379 1518 aa19.6■□□□□ 0.73
RPE-209ENST00000438191 ARHGEF11O15085 1522 aa19.59■□□□□ 0.73
RPE-209ENST00000438191 MRC2Q9UBG0 1479 aa19.59■□□□□ 0.73
RPE-209ENST00000438191 CYB5RLQ6IPT4 315 aa19.49■□□□□ 0.71
RPE-209ENST00000438191 ILDR1Q86SU0 546 aaPredicted RBP19.49■□□□□ 0.71
RPE-209ENST00000438191 BAZ1BQ9UIG0 1483 aaKnown RBP19.48■□□□□ 0.71
RPE-209ENST00000438191 SMARCA4P51532 1647 aa19.43■□□□□ 0.7
RPE-209ENST00000438191 CADPSQ9ULU8 1353 aa19.32■□□□□ 0.68
RPE-209ENST00000438191 ARAP1Q96P48 1450 aa19.32■□□□□ 0.68
RPE-209ENST00000438191 PEG3Q9GZU2 1588 aa19.26■□□□□ 0.67
RPE-209ENST00000438191 CEP164Q9UPV0 1460 aa19.24■□□□□ 0.67
RPE-209ENST00000438191 FANCD2Q9BXW9 1451 aa19.11■□□□□ 0.65
RPE-209ENST00000438191 URB2Q14146 1524 aaKnown RBP19.06■□□□□ 0.64
RPE-209ENST00000438191 RSF1Q96T23 1441 aaPredicted RBP19.05■□□□□ 0.64
RPE-209ENST00000438191 ZNF608Q9ULD9 1512 aaPredicted RBP19.03■□□□□ 0.64
RPE-209ENST00000438191 CHD1O14646 1710 aa18.98■□□□□ 0.63
RPE-209ENST00000438191 IFT140Q96RY7 1462 aa18.91■□□□□ 0.62
RPE-209ENST00000438191 MROH2BQ7Z745 1585 aa18.9■□□□□ 0.62
RPE-209ENST00000438191 EIF4G3O43432 1585 aaKnown RBP18.86■□□□□ 0.61
RPE-209ENST00000438191 CFTRP13569 1480 aa18.84■□□□□ 0.61
RPE-209ENST00000438191 FBLN2P98095 1184 aa18.77■□□□□ 0.6
RPE-209ENST00000438191 KDM4FA0A1W2PPD8 638 aa18.76■□□□□ 0.59
RPE-209ENST00000438191 CLASP1Q7Z460 1538 aa18.74■□□□□ 0.59
RPE-209ENST00000438191 AQRO60306 1485 aaKnown RBP eCLIP18.68■□□□□ 0.582e-6■■□□□ 13.2
RPE-209ENST00000438191 TOPBP1Q92547 1522 aa18.62■□□□□ 0.57
RPE-209ENST00000438191 WIZO95785 1651 aa18.62■□□□□ 0.57
RPE-209ENST00000438191 GAPVD1Q14C86 1478 aa18.61■□□□□ 0.57
RPE-209ENST00000438191 KIF13AQ9H1H9 1805 aa18.58■□□□□ 0.57
RPE-209ENST00000438191 PRDM2Q13029 1718 aa18.58■□□□□ 0.57
RPE-209ENST00000438191 TARBP1Q13395 1621 aaKnown RBP18.58■□□□□ 0.56
RPE-209ENST00000438191 SYNJ1O43426 1573 aa18.57■□□□□ 0.56
RPE-209ENST00000438191 ERCC6L2Q5T890 1561 aa18.56■□□□□ 0.56
RPE-209ENST00000438191 FBXO41Q8TF61 875 aa18.52■□□□□ 0.56
RPE-209ENST00000438191 ABCC8Q09428 1581 aa18.47■□□□□ 0.55
RPE-209ENST00000438191 HECW2Q9P2P5 1572 aa18.47■□□□□ 0.55
RPE-209ENST00000438191 SNAPC4Q5SXM2 1469 aa18.45■□□□□ 0.54
RPE-209ENST00000438191 DNMBPQ6XZF7 1577 aa18.43■□□□□ 0.54
RPE-209ENST00000438191 LMTK3Q96Q04 1460 aa18.43■□□□□ 0.54
RPE-209ENST00000438191 CHMP7Q8WUX9 453 aaPredicted RBP18.42■□□□□ 0.54
RPE-209ENST00000438191 KDM6BO15054 1643 aa18.36■□□□□ 0.53
RPE-209ENST00000438191 TDRD9Q8NDG6 1382 aaKnown RBP18.35■□□□□ 0.53
RPE-209ENST00000438191 POLA1P09884 1462 aaPredicted RBP18.34■□□□□ 0.53
RPE-209ENST00000438191 MAGI1Q96QZ7 1491 aaPredicted RBP18.34■□□□□ 0.53
RPE-209ENST00000438191 SOCS7O14512 581 aa18.33■□□□□ 0.52
RPE-209ENST00000438191 SYNJ2O15056 1496 aa18.3■□□□□ 0.52
RPE-209ENST00000438191 RAD54L2Q9Y4B4 1467 aa18.3■□□□□ 0.52
RPE-209ENST00000438191 ADGRL1O94910 1474 aa18.28■□□□□ 0.52
RPE-209ENST00000438191 TOP2AP11388 1531 aaKnown RBP18.28■□□□□ 0.52
RPE-209ENST00000438191 WDR97A6NE52 1622 aa18.27■□□□□ 0.52
RPE-209ENST00000438191 FAM69CQ0P6D2 419 aa18.27■□□□□ 0.52
RPE-209ENST00000438191 ABCC10Q5T3U5 1492 aa18.26■□□□□ 0.51
RPE-209ENST00000438191 ILDR2Q71H61 639 aa18.23■□□□□ 0.51
RPE-209ENST00000438191 SOGA1O94964 1423 aa18.22■□□□□ 0.51
RPE-209ENST00000438191 GRIN2BQ13224 1484 aa18.21■□□□□ 0.51
RPE-209ENST00000438191 DIP2BQ9P265 1576 aa18.19■□□□□ 0.5
RPE-209ENST00000438191 CEP170Q5SW79 1584 aa18.17■□□□□ 0.5
RPE-209ENST00000438191 TSPOAP1O95153 1857 aa18.12■□□□□ 0.49
RPE-209ENST00000438191 MAPKBP1O60336 1514 aa18.1■□□□□ 0.49
RPE-209ENST00000438191 CCDC88BA6NC98 1476 aa18.08■□□□□ 0.49
RPE-209ENST00000438191 PBRM1Q86U86 1689 aa18.08■□□□□ 0.48
RPE-209ENST00000438191 SHROOM2Q13796 1616 aa18.08■□□□□ 0.48
RPE-209ENST00000438191 DISP3Q9P2K9 1392 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms