RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 NISCHQ9Y2I1 1504 aa19.4■□□□□ 0.7
RPE-216ENST00000454822 CCDC180Q9P1Z9 1646 aa16.72■□□□□ 0.27
RPE-216ENST00000454822 ZCCHC6Q5VYS8 1495 aaKnown RBP16.32■□□□□ 0.2
RPE-216ENST00000454822 SHROOM4Q9ULL8 1493 aa16.1■□□□□ 0.17
RPE-216ENST00000454822 DCAF8L2P0C7V8 631 aa16.07■□□□□ 0.16
RPE-216ENST00000454822 DCAF1Q9Y4B6 1507 aa15.99■□□□□ 0.15
RPE-216ENST00000454822 ABCC9O60706 1549 aa15.71■□□□□ 0.11
RPE-216ENST00000454822 MYO15BQ96JP2 1530 aa15.7■□□□□ 0.1
RPE-216ENST00000454822 SUPT5HO00267 1087 aaKnown RBP15.63■□□□□ 0.09
RPE-216ENST00000454822 NACADO15069 1562 aa15.55■□□□□ 0.08
RPE-216ENST00000454822 SCRIBQ14160 1630 aa15.49■□□□□ 0.07
RPE-216ENST00000454822 RB1CC1Q8TDY2 1594 aa15.36■□□□□ 0.05
RPE-216ENST00000454822 RSF1Q96T23 1441 aaPredicted RBP15.18■□□□□ 0.02
RPE-216ENST00000454822 CECR2Q9BXF3 1484 aa15.1■□□□□ 0.01
RPE-216ENST00000454822 UNC13AQ9UPW8 1703 aa15.07■□□□□ 0
RPE-216ENST00000454822 CHIC1Q5VXU3 224 aa15.07■□□□□ 0
RPE-216ENST00000454822 MROH2BQ7Z745 1585 aa15.02■□□□□ -0
RPE-216ENST00000454822 BAZ1AQ9NRL2 1556 aaPredicted RBP14.93□□□□□ -0.02
RPE-216ENST00000454822 PABPN1Q86U42 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
RPE-216ENST00000454822 BICRAQ9NZM4 1560 aa14.93□□□□□ -0.02
RPE-216ENST00000454822 WIZO95785 1651 aa14.91□□□□□ -0.02
RPE-216ENST00000454822 SMARCA4P51532 1647 aa14.84□□□□□ -0.03
RPE-216ENST00000454822 TOP2AP11388 1531 aaKnown RBP14.72□□□□□ -0.05
RPE-216ENST00000454822 TRIM41Q8WV44 630 aa14.65□□□□□ -0.06
RPE-216ENST00000454822 CCDC88BA6NC98 1476 aa14.63□□□□□ -0.07
RPE-216ENST00000454822 PEG3Q9GZU2 1588 aa14.62□□□□□ -0.07
RPE-216ENST00000454822 SMARCA2P51531 1590 aa14.61□□□□□ -0.07
RPE-216ENST00000454822 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
RPE-216ENST00000454822 EIF4G1Q04637 1599 aaKnown RBP14.56□□□□□ -0.08
RPE-216ENST00000454822 LOC105371045A0A1W2PR82 267 aa14.56□□□□□ -0.08
RPE-216ENST00000454822 BAZ1BQ9UIG0 1483 aaKnown RBP14.49□□□□□ -0.09
RPE-216ENST00000454822 FAM9AQ8IZU1 332 aaPredicted RBP14.44□□□□□ -0.1
RPE-216ENST00000454822 ABCC8Q09428 1581 aa14.4□□□□□ -0.1
RPE-216ENST00000454822 NCAPD3P42695 1498 aa14.39□□□□□ -0.11
RPE-216ENST00000454822 HMGXB3Q12766 1538 aa14.34□□□□□ -0.11
RPE-216ENST00000454822 WRNQ14191 1432 aaPredicted RBP eCLIP14.26□□□□□ -0.13
RPE-216ENST00000454822 EHMT2Q96KQ7 1210 aa14.25□□□□□ -0.13
RPE-216ENST00000454822 SOGA1O94964 1423 aa14.2□□□□□ -0.14
RPE-216ENST00000454822 CC2D2AQ9P2K1 1620 aa14.18□□□□□ -0.14
RPE-216ENST00000454822 SYNJ1O43426 1573 aa14.18□□□□□ -0.14
RPE-216ENST00000454822 EEA1Q15075 1411 aa14.16□□□□□ -0.14
RPE-216ENST00000454822 RUSC2Q8N2Y8 1516 aa14.15□□□□□ -0.14
RPE-216ENST00000454822 CFTRP13569 1480 aa14.14□□□□□ -0.15
RPE-216ENST00000454822 CSRNP3Q8WYN3 585 aa14.14□□□□□ -0.15
RPE-216ENST00000454822 PCGF6Q9BYE7 350 aa14.13□□□□□ -0.15
RPE-216ENST00000454822 TOP2BQ02880 1626 aa14.09□□□□□ -0.15
RPE-216ENST00000454822 CADPSQ9ULU8 1353 aa14.06□□□□□ -0.16
RPE-216ENST00000454822 BIVM-ERCC5R4GMW8 1640 aa14.05□□□□□ -0.16
RPE-216ENST00000454822 TRIM26Q12899 539 aaPredicted RBP14.03□□□□□ -0.16
RPE-216ENST00000454822 TNIKQ9UKE5 1360 aa14.02□□□□□ -0.17
RPE-216ENST00000454822 CUX1P39880 1505 aa14.02□□□□□ -0.17
RPE-216ENST00000454822 PRDM2Q13029 1718 aa14.01□□□□□ -0.17
RPE-216ENST00000454822 UBTFP17480 764 aaKnown RBP14□□□□□ -0.17
RPE-216ENST00000454822 GOLGA3Q08378 1498 aa13.99□□□□□ -0.17
RPE-216ENST00000454822 DNAJC5BQ9UF47 199 aa13.96□□□□□ -0.17
RPE-216ENST00000454822 CEP164Q9UPV0 1460 aa13.96□□□□□ -0.17
RPE-216ENST00000454822 CEP162Q5TB80 1403 aa13.96□□□□□ -0.18
RPE-216ENST00000454822 KIF21BO75037 1637 aa13.95□□□□□ -0.18
RPE-216ENST00000454822 HRCP23327 699 aa13.9□□□□□ -0.18
RPE-216ENST00000454822 FANCD2Q9BXW9 1451 aa13.89□□□□□ -0.19
RPE-216ENST00000454822 RAPGEF2Q9Y4G8 1499 aa13.88□□□□□ -0.19
RPE-216ENST00000454822 NESP48681 1621 aa13.88□□□□□ -0.19
RPE-216ENST00000454822 KIF27Q86VH2 1401 aa13.88□□□□□ -0.19
RPE-216ENST00000454822 PPARGC1BQ86YN6 1023 aaKnown RBP13.86□□□□□ -0.19
RPE-216ENST00000454822 PRXQ9BXM0 1461 aa13.84□□□□□ -0.19
RPE-216ENST00000454822 LAMC3Q9Y6N6 1575 aa13.82□□□□□ -0.2
RPE-216ENST00000454822 FGD5Q6ZNL6 1462 aa13.82□□□□□ -0.2
RPE-216ENST00000454822 ERICH3Q5RHP9 1530 aa13.81□□□□□ -0.2
RPE-216ENST00000454822 CLIP1P30622 1438 aa13.8□□□□□ -0.2
RPE-216ENST00000454822 CUX2O14529 1486 aa13.8□□□□□ -0.2
RPE-216ENST00000454822 DNMBPQ6XZF7 1577 aa13.78□□□□□ -0.2
RPE-216ENST00000454822 TOPBP1Q92547 1522 aa13.77□□□□□ -0.21
RPE-216ENST00000454822 IGF1RP08069 1367 aa13.76□□□□□ -0.21
RPE-216ENST00000454822 PDS5BQ9NTI5 1447 aa13.74□□□□□ -0.21
RPE-216ENST00000454822 RANGAP1P46060 587 aaPredicted RBP13.74□□□□□ -0.21
RPE-216ENST00000454822 POLA1P09884 1462 aaPredicted RBP13.72□□□□□ -0.21
RPE-216ENST00000454822 RAD54L2Q9Y4B4 1467 aa13.72□□□□□ -0.21
RPE-216ENST00000454822 URB2Q14146 1524 aaKnown RBP13.71□□□□□ -0.21
RPE-216ENST00000454822 VPS8Q8N3P4 1428 aa13.7□□□□□ -0.22
RPE-216ENST00000454822 CARMIL1Q5VZK9 1371 aa13.69□□□□□ -0.22
RPE-216ENST00000454822 ABCA10Q8WWZ4 1543 aa13.69□□□□□ -0.22
RPE-216ENST00000454822 TTBK1Q5TCY1 1321 aaPredicted RBP13.69□□□□□ -0.22
RPE-216ENST00000454822 KIF21AQ7Z4S6 1674 aa13.66□□□□□ -0.22
RPE-216ENST00000454822 ARAP1Q96P48 1450 aa13.62□□□□□ -0.23
RPE-216ENST00000454822 APLP2Q06481 763 aa13.61□□□□□ -0.23
RPE-216ENST00000454822 WDR97A6NE52 1622 aa13.58□□□□□ -0.24
RPE-216ENST00000454822 ARHGAP35Q9NRY4 1499 aa13.58□□□□□ -0.24
RPE-216ENST00000454822 TDRD9Q8NDG6 1382 aaKnown RBP13.58□□□□□ -0.24
RPE-216ENST00000454822 ZEB1P37275 1124 aaPredicted RBP13.57□□□□□ -0.24
RPE-216ENST00000454822 CUL7Q14999 1698 aa13.55□□□□□ -0.24
RPE-216ENST00000454822 MRC2Q9UBG0 1479 aa13.54□□□□□ -0.24
RPE-216ENST00000454822 ABCA5Q8WWZ7 1642 aa13.54□□□□□ -0.24
RPE-216ENST00000454822 GAPVD1Q14C86 1478 aa13.54□□□□□ -0.24
RPE-216ENST00000454822 TARBP1Q13395 1621 aaKnown RBP13.52□□□□□ -0.25
RPE-216ENST00000454822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.49□□□□□ -0.25
RPE-216ENST00000454822 KANK4Q5T7N3 995 aaPredicted RBP13.48□□□□□ -0.25
RPE-216ENST00000454822 P3H3Q8IVL6 736 aa13.45□□□□□ -0.26
RPE-216ENST00000454822 CCER1Q8TC90 406 aaPredicted RBP13.45□□□□□ -0.26
RPE-216ENST00000454822 WDR62O43379 1518 aa13.44□□□□□ -0.26
RPE-216ENST00000454822 AQRO60306 1485 aaKnown RBP eCLIP13.44□□□□□ -0.262e-6■■□□□ 13.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms