RNA–Protein interactions for RNA: ENST00000603946.5

NOLC1-208, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best)

Gene NOLC1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-208ENST00000603946 NISCHQ9Y2I1 1504 aa18.53■□□□□ 0.56
NOLC1-208ENST00000603946 DCAF8L2P0C7V8 631 aa16.21■□□□□ 0.19
NOLC1-208ENST00000603946 ABCC9O60706 1549 aa16.02■□□□□ 0.15
NOLC1-208ENST00000603946 CCDC180Q9P1Z9 1646 aa15.96■□□□□ 0.15
NOLC1-208ENST00000603946 SHROOM4Q9ULL8 1493 aa15.59■□□□□ 0.09
NOLC1-208ENST00000603946 ZCCHC6Q5VYS8 1495 aaKnown RBP15.44■□□□□ 0.06
NOLC1-208ENST00000603946 PABPN1Q86U42 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
NOLC1-208ENST00000603946 SCRIBQ14160 1630 aa15.13■□□□□ 0.01
NOLC1-208ENST00000603946 RB1CC1Q8TDY2 1594 aa15.09■□□□□ 0.01
NOLC1-208ENST00000603946 NACADO15069 1562 aa15.07■□□□□ 0
NOLC1-208ENST00000603946 DCAF1Q9Y4B6 1507 aa15□□□□□ -0.01
NOLC1-208ENST00000603946 SUPT5HO00267 1087 aaKnown RBP14.88□□□□□ -0.03
NOLC1-208ENST00000603946 MYO15BQ96JP2 1530 aa14.86□□□□□ -0.03
NOLC1-208ENST00000603946 UNC13AQ9UPW8 1703 aa14.79□□□□□ -0.04
NOLC1-208ENST00000603946 BICRAQ9NZM4 1560 aa14.71□□□□□ -0.05
NOLC1-208ENST00000603946 CECR2Q9BXF3 1484 aa14.68□□□□□ -0.06
NOLC1-208ENST00000603946 DNAJC5BQ9UF47 199 aa14.58□□□□□ -0.08
NOLC1-208ENST00000603946 MROH2BQ7Z745 1585 aa14.46□□□□□ -0.1
NOLC1-208ENST00000603946 RSF1Q96T23 1441 aaPredicted RBP14.4□□□□□ -0.1
NOLC1-208ENST00000603946 EIF4G1Q04637 1599 aaKnown RBP14.33□□□□□ -0.12
NOLC1-208ENST00000603946 WIZO95785 1651 aa14.32□□□□□ -0.12
NOLC1-208ENST00000603946 SMARCA4P51532 1647 aa14.27□□□□□ -0.13
NOLC1-208ENST00000603946 BAZ1AQ9NRL2 1556 aaPredicted RBP14.27□□□□□ -0.13
NOLC1-208ENST00000603946 CC2D2AQ9P2K1 1620 aa14.24□□□□□ -0.13
NOLC1-208ENST00000603946 ATAD2BQ9ULI0 1458 aa14.2□□□□□ -0.14
NOLC1-208ENST00000603946 BAZ1BQ9UIG0 1483 aaKnown RBP14.14□□□□□ -0.15
NOLC1-208ENST00000603946 SMARCA2P51531 1590 aa14.03□□□□□ -0.16
NOLC1-208ENST00000603946 NCAPD3P42695 1498 aa14.03□□□□□ -0.16
NOLC1-208ENST00000603946 CCDC88BA6NC98 1476 aa14.02□□□□□ -0.17
NOLC1-208ENST00000603946 NESP48681 1621 aa13.96□□□□□ -0.17
NOLC1-208ENST00000603946 TOP2AP11388 1531 aaKnown RBP13.95□□□□□ -0.18
NOLC1-208ENST00000603946 EHMT2Q96KQ7 1210 aa13.95□□□□□ -0.18
NOLC1-208ENST00000603946 PEG3Q9GZU2 1588 aa13.9□□□□□ -0.18
NOLC1-208ENST00000603946 FAM9AQ8IZU1 332 aaPredicted RBP13.86□□□□□ -0.19
NOLC1-208ENST00000603946 HMGXB3Q12766 1538 aa13.84□□□□□ -0.19
NOLC1-208ENST00000603946 CHIC1Q5VXU3 224 aa13.82□□□□□ -0.2
NOLC1-208ENST00000603946 TRIM41Q8WV44 630 aa13.8□□□□□ -0.2
NOLC1-208ENST00000603946 CADPSQ9ULU8 1353 aa13.79□□□□□ -0.2
NOLC1-208ENST00000603946 ABCC8Q09428 1581 aa13.76□□□□□ -0.21
NOLC1-208ENST00000603946 ERCC6Q03468 1493 aa13.68□□□□□ -0.22
NOLC1-208ENST00000603946 CFTRP13569 1480 aa13.67□□□□□ -0.22
NOLC1-208ENST00000603946 FANCD2Q9BXW9 1451 aa13.65□□□□□ -0.22
NOLC1-208ENST00000603946 PDS5BQ9NTI5 1447 aa13.59□□□□□ -0.23
NOLC1-208ENST00000603946 WRNQ14191 1432 aaPredicted RBP eCLIP13.57□□□□□ -0.24
NOLC1-208ENST00000603946 LOC105371045A0A1W2PR82 267 aa13.57□□□□□ -0.24
NOLC1-208ENST00000603946 RANGAP1P46060 587 aaPredicted RBP13.57□□□□□ -0.24
NOLC1-208ENST00000603946 CEP164Q9UPV0 1460 aa13.54□□□□□ -0.24
NOLC1-208ENST00000603946 KIF21AQ7Z4S6 1674 aa13.53□□□□□ -0.24
NOLC1-208ENST00000603946 LAMC3Q9Y6N6 1575 aa13.52□□□□□ -0.25
NOLC1-208ENST00000603946 RAD54L2Q9Y4B4 1467 aa13.5□□□□□ -0.25
NOLC1-208ENST00000603946 SYNJ1O43426 1573 aa13.49□□□□□ -0.25
NOLC1-208ENST00000603946 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
NOLC1-208ENST00000603946 URB2Q14146 1524 aaKnown RBP13.49□□□□□ -0.25
NOLC1-208ENST00000603946 SOGA1O94964 1423 aa13.48□□□□□ -0.25
NOLC1-208ENST00000603946 TDRD9Q8NDG6 1382 aaKnown RBP13.48□□□□□ -0.25
NOLC1-208ENST00000603946 CUX1P39880 1505 aa13.48□□□□□ -0.25
NOLC1-208ENST00000603946 FBLN2P98095 1184 aa13.46□□□□□ -0.25
NOLC1-208ENST00000603946 TOPBP1Q92547 1522 aa13.42□□□□□ -0.26
NOLC1-208ENST00000603946 FGD5Q6ZNL6 1462 aa13.42□□□□□ -0.26
NOLC1-208ENST00000603946 AQRO60306 1485 aaKnown RBP eCLIP13.39□□□□□ -0.271e-6■■■■□ 26
NOLC1-208ENST00000603946 MRC2Q9UBG0 1479 aa13.39□□□□□ -0.27
NOLC1-208ENST00000603946 POLA1P09884 1462 aaPredicted RBP13.38□□□□□ -0.27
NOLC1-208ENST00000603946 ZNF608Q9ULD9 1512 aaPredicted RBP13.36□□□□□ -0.27
NOLC1-208ENST00000603946 CUX2O14529 1486 aa13.36□□□□□ -0.27
NOLC1-208ENST00000603946 TTBK1Q5TCY1 1321 aaPredicted RBP13.35□□□□□ -0.27
NOLC1-208ENST00000603946 UBTFP17480 764 aaKnown RBP13.34□□□□□ -0.27
NOLC1-208ENST00000603946 CSRNP3Q8WYN3 585 aa13.33□□□□□ -0.28
NOLC1-208ENST00000603946 TOP2BQ02880 1626 aa13.3□□□□□ -0.28
NOLC1-208ENST00000603946 DNMBPQ6XZF7 1577 aa13.3□□□□□ -0.28
NOLC1-208ENST00000603946 PRDM2Q13029 1718 aa13.28□□□□□ -0.28
NOLC1-208ENST00000603946 THOC2Q8NI27 1593 aaKnown RBP13.27□□□□□ -0.28
NOLC1-208ENST00000603946 P3H3Q8IVL6 736 aa13.24□□□□□ -0.29
NOLC1-208ENST00000603946 WDR62O43379 1518 aa13.23□□□□□ -0.29
NOLC1-208ENST00000603946 CHMP7Q8WUX9 453 aaPredicted RBP13.22□□□□□ -0.29
NOLC1-208ENST00000603946 KIF27Q86VH2 1401 aa13.22□□□□□ -0.29
NOLC1-208ENST00000603946 IGF1RP08069 1367 aa13.21□□□□□ -0.29
NOLC1-208ENST00000603946 BIVM-ERCC5R4GMW8 1640 aa13.2□□□□□ -0.3
NOLC1-208ENST00000603946 GAPVD1Q14C86 1478 aa13.19□□□□□ -0.3
NOLC1-208ENST00000603946 PPARGC1BQ86YN6 1023 aaKnown RBP13.18□□□□□ -0.3
NOLC1-208ENST00000603946 CARMIL1Q5VZK9 1371 aa13.16□□□□□ -0.3
NOLC1-208ENST00000603946 IFT140Q96RY7 1462 aa13.15□□□□□ -0.3
NOLC1-208ENST00000603946 RAPGEF2Q9Y4G8 1499 aa13.14□□□□□ -0.31
NOLC1-208ENST00000603946 TARBP1Q13395 1621 aaKnown RBP13.14□□□□□ -0.31
NOLC1-208ENST00000603946 ABCA10Q8WWZ4 1543 aa13.14□□□□□ -0.31
NOLC1-208ENST00000603946 ARID3CA6NKF2 412 aa13.13□□□□□ -0.31
NOLC1-208ENST00000603946 ATP1B4Q9UN42 357 aaPredicted RBP13.12□□□□□ -0.31
NOLC1-208ENST00000603946 SNAPC4Q5SXM2 1469 aa13.11□□□□□ -0.31
NOLC1-208ENST00000603946 SLC24A1O60721 1099 aa13.1□□□□□ -0.31
NOLC1-208ENST00000603946 EIF4G3O43432 1585 aaKnown RBP13.08□□□□□ -0.32
NOLC1-208ENST00000603946 GRIN2BQ13224 1484 aa13.05□□□□□ -0.32
NOLC1-208ENST00000603946 ABCA5Q8WWZ7 1642 aa12.99□□□□□ -0.33
NOLC1-208ENST00000603946 PRXQ9BXM0 1461 aa12.98□□□□□ -0.33
NOLC1-208ENST00000603946 OSCARQ8IYS5 282 aa12.98□□□□□ -0.33
NOLC1-208ENST00000603946 EEA1Q15075 1411 aa12.97□□□□□ -0.33
NOLC1-208ENST00000603946 WDR97A6NE52 1622 aa12.97□□□□□ -0.33
NOLC1-208ENST00000603946 JPH4Q96JJ6 628 aa12.96□□□□□ -0.33
NOLC1-208ENST00000603946 FHAD1B1AJZ9 1412 aa12.96□□□□□ -0.33
NOLC1-208ENST00000603946 GOLGA3Q08378 1498 aa12.96□□□□□ -0.33
NOLC1-208ENST00000603946 PBRM1Q86U86 1689 aa12.95□□□□□ -0.34
NOLC1-208ENST00000603946 ERICH3Q5RHP9 1530 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms