RNA–Protein interactions for RNA: ENST00000464969.6

NOLC1-204, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 2

Gene NOLC1, Length 2,288 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-204ENST00000464969 NISCHQ9Y2I1 1504 aa27.13■■□□□ 1.93
NOLC1-204ENST00000464969 CCDC180Q9P1Z9 1646 aa23.86■■□□□ 1.41
NOLC1-204ENST00000464969 ABCC9O60706 1549 aa23.18■■□□□ 1.3
NOLC1-204ENST00000464969 DCAF8L2P0C7V8 631 aa22.71■■□□□ 1.23
NOLC1-204ENST00000464969 ZCCHC6Q5VYS8 1495 aaKnown RBP22.67■■□□□ 1.22
NOLC1-204ENST00000464969 NACADO15069 1562 aa22.36■■□□□ 1.17
NOLC1-204ENST00000464969 DCAF1Q9Y4B6 1507 aa22.36■■□□□ 1.17
NOLC1-204ENST00000464969 RB1CC1Q8TDY2 1594 aa22.32■■□□□ 1.16
NOLC1-204ENST00000464969 MYO15BQ96JP2 1530 aa22.28■■□□□ 1.16
NOLC1-204ENST00000464969 SCRIBQ14160 1630 aa21.96■■□□□ 1.11
NOLC1-204ENST00000464969 SHROOM4Q9ULL8 1493 aa21.87■■□□□ 1.09
NOLC1-204ENST00000464969 UNC13AQ9UPW8 1703 aa21.87■■□□□ 1.09
NOLC1-204ENST00000464969 PABPN1Q86U42 306 aaKnown RBP eCLIP21.78■■□□□ 1.08
NOLC1-204ENST00000464969 BICRAQ9NZM4 1560 aa21.69■■□□□ 1.06
NOLC1-204ENST00000464969 CECR2Q9BXF3 1484 aa21.18■□□□□ 0.98
NOLC1-204ENST00000464969 EIF4G1Q04637 1599 aaKnown RBP21.08■□□□□ 0.96
NOLC1-204ENST00000464969 MROH2BQ7Z745 1585 aa20.97■□□□□ 0.95
NOLC1-204ENST00000464969 BAZ1AQ9NRL2 1556 aaPredicted RBP20.97■□□□□ 0.95
NOLC1-204ENST00000464969 DNAJC5BQ9UF47 199 aa20.97■□□□□ 0.95
NOLC1-204ENST00000464969 SMARCA4P51532 1647 aa20.97■□□□□ 0.95
NOLC1-204ENST00000464969 CC2D2AQ9P2K1 1620 aa20.91■□□□□ 0.94
NOLC1-204ENST00000464969 RSF1Q96T23 1441 aaPredicted RBP20.86■□□□□ 0.93
NOLC1-204ENST00000464969 WIZO95785 1651 aa20.78■□□□□ 0.92
NOLC1-204ENST00000464969 ATAD2BQ9ULI0 1458 aa20.77■□□□□ 0.92
NOLC1-204ENST00000464969 SUPT5HO00267 1087 aaKnown RBP20.76■□□□□ 0.91
NOLC1-204ENST00000464969 SMARCA2P51531 1590 aa20.71■□□□□ 0.91
NOLC1-204ENST00000464969 PEG3Q9GZU2 1588 aa20.69■□□□□ 0.9
NOLC1-204ENST00000464969 NCAPD3P42695 1498 aa20.66■□□□□ 0.9
NOLC1-204ENST00000464969 BAZ1BQ9UIG0 1483 aaKnown RBP20.63■□□□□ 0.89
NOLC1-204ENST00000464969 HMGXB3Q12766 1538 aa20.57■□□□□ 0.88
NOLC1-204ENST00000464969 TOP2AP11388 1531 aaKnown RBP20.5■□□□□ 0.87
NOLC1-204ENST00000464969 CCDC88BA6NC98 1476 aa20.32■□□□□ 0.84
NOLC1-204ENST00000464969 NESP48681 1621 aa20.18■□□□□ 0.82
NOLC1-204ENST00000464969 CADPSQ9ULU8 1353 aa20.12■□□□□ 0.81
NOLC1-204ENST00000464969 CFTRP13569 1480 aa20.06■□□□□ 0.8
NOLC1-204ENST00000464969 LAMC3Q9Y6N6 1575 aa20.04■□□□□ 0.8
NOLC1-204ENST00000464969 PDS5BQ9NTI5 1447 aa19.92■□□□□ 0.78
NOLC1-204ENST00000464969 FANCD2Q9BXW9 1451 aa19.91■□□□□ 0.78
NOLC1-204ENST00000464969 ERCC6Q03468 1493 aa19.9■□□□□ 0.78
NOLC1-204ENST00000464969 KIF21AQ7Z4S6 1674 aa19.89■□□□□ 0.77
NOLC1-204ENST00000464969 PRDM2Q13029 1718 aa19.88■□□□□ 0.77
NOLC1-204ENST00000464969 CEP164Q9UPV0 1460 aa19.82■□□□□ 0.76
NOLC1-204ENST00000464969 ABCC8Q09428 1581 aa19.75■□□□□ 0.75
NOLC1-204ENST00000464969 MRC2Q9UBG0 1479 aa19.71■□□□□ 0.75
NOLC1-204ENST00000464969 URB2Q14146 1524 aaKnown RBP19.7■□□□□ 0.74
NOLC1-204ENST00000464969 THOC2Q8NI27 1593 aaKnown RBP19.69■□□□□ 0.74
NOLC1-204ENST00000464969 WRNQ14191 1432 aaPredicted RBP eCLIP19.65■□□□□ 0.74
NOLC1-204ENST00000464969 CUX1P39880 1505 aa19.64■□□□□ 0.73
NOLC1-204ENST00000464969 TOPBP1Q92547 1522 aa19.62■□□□□ 0.73
NOLC1-204ENST00000464969 WDR62O43379 1518 aa19.61■□□□□ 0.73
NOLC1-204ENST00000464969 SYNJ1O43426 1573 aa19.6■□□□□ 0.73
NOLC1-204ENST00000464969 DNMBPQ6XZF7 1577 aa19.6■□□□□ 0.73
NOLC1-204ENST00000464969 CHIC1Q5VXU3 224 aa19.53■□□□□ 0.72
NOLC1-204ENST00000464969 TOP2BQ02880 1626 aa19.52■□□□□ 0.72
NOLC1-204ENST00000464969 FGD5Q6ZNL6 1462 aa19.51■□□□□ 0.71
NOLC1-204ENST00000464969 TRIM41Q8WV44 630 aa19.51■□□□□ 0.71
NOLC1-204ENST00000464969 BIVM-ERCC5R4GMW8 1640 aa19.5■□□□□ 0.71
NOLC1-204ENST00000464969 POLA1P09884 1462 aaPredicted RBP19.49■□□□□ 0.71
NOLC1-204ENST00000464969 CUX2O14529 1486 aa19.47■□□□□ 0.71
NOLC1-204ENST00000464969 RAD54L2Q9Y4B4 1467 aa19.47■□□□□ 0.71
NOLC1-204ENST00000464969 SOGA1O94964 1423 aa19.43■□□□□ 0.7
NOLC1-204ENST00000464969 IFT140Q96RY7 1462 aa19.37■□□□□ 0.69
NOLC1-204ENST00000464969 TARBP1Q13395 1621 aaKnown RBP19.36■□□□□ 0.69
NOLC1-204ENST00000464969 ZNF608Q9ULD9 1512 aaPredicted RBP19.34■□□□□ 0.69
NOLC1-204ENST00000464969 TDRD9Q8NDG6 1382 aaKnown RBP19.33■□□□□ 0.68
NOLC1-204ENST00000464969 ABCA10Q8WWZ4 1543 aa19.29■□□□□ 0.68
NOLC1-204ENST00000464969 AQRO60306 1485 aaKnown RBP eCLIP19.29■□□□□ 0.681e-6■■■■□ 26
NOLC1-204ENST00000464969 WDR97A6NE52 1622 aa19.27■□□□□ 0.68
NOLC1-204ENST00000464969 RUSC2Q8N2Y8 1516 aa19.24■□□□□ 0.67
NOLC1-204ENST00000464969 EIF4G3O43432 1585 aaKnown RBP19.23■□□□□ 0.67
NOLC1-204ENST00000464969 FAM9AQ8IZU1 332 aaPredicted RBP19.21■□□□□ 0.67
NOLC1-204ENST00000464969 GAPVD1Q14C86 1478 aa19.19■□□□□ 0.66
NOLC1-204ENST00000464969 ABCA5Q8WWZ7 1642 aa19.18■□□□□ 0.66
NOLC1-204ENST00000464969 KIF27Q86VH2 1401 aa19.18■□□□□ 0.66
NOLC1-204ENST00000464969 GRIN2BQ13224 1484 aa19.12■□□□□ 0.65
NOLC1-204ENST00000464969 PBRM1Q86U86 1689 aa19.11■□□□□ 0.65
NOLC1-204ENST00000464969 IGF1RP08069 1367 aa19.09■□□□□ 0.65
NOLC1-204ENST00000464969 SNAPC4Q5SXM2 1469 aa19.09■□□□□ 0.65
NOLC1-204ENST00000464969 ERICH3Q5RHP9 1530 aa19.05■□□□□ 0.64
NOLC1-204ENST00000464969 FBLN2P98095 1184 aa19.04■□□□□ 0.64
NOLC1-204ENST00000464969 CSRNP3Q8WYN3 585 aa19.03■□□□□ 0.64
NOLC1-204ENST00000464969 EHMT2Q96KQ7 1210 aa19.02■□□□□ 0.64
NOLC1-204ENST00000464969 EEA1Q15075 1411 aa19■□□□□ 0.63
NOLC1-204ENST00000464969 MAGI1Q96QZ7 1491 aaPredicted RBP19■□□□□ 0.63
NOLC1-204ENST00000464969 CARMIL1Q5VZK9 1371 aa18.98■□□□□ 0.63
NOLC1-204ENST00000464969 ADAMTS12P58397 1594 aa18.98■□□□□ 0.63
NOLC1-204ENST00000464969 CHMP7Q8WUX9 453 aaPredicted RBP18.98■□□□□ 0.63
NOLC1-204ENST00000464969 FHAD1B1AJZ9 1412 aa18.96■□□□□ 0.63
NOLC1-204ENST00000464969 SYNJ2O15056 1496 aa18.94■□□□□ 0.62
NOLC1-204ENST00000464969 CUL7Q14999 1698 aa18.94■□□□□ 0.62
NOLC1-204ENST00000464969 CHD1O14646 1710 aa18.92■□□□□ 0.62
NOLC1-204ENST00000464969 PRXQ9BXM0 1461 aa18.91■□□□□ 0.62
NOLC1-204ENST00000464969 RAPGEF2Q9Y4G8 1499 aa18.89■□□□□ 0.61
NOLC1-204ENST00000464969 GRIN2AQ12879 1464 aa18.88■□□□□ 0.61
NOLC1-204ENST00000464969 LOC105371045A0A1W2PR82 267 aa18.82■□□□□ 0.6
NOLC1-204ENST00000464969 KIF21BO75037 1637 aa18.82■□□□□ 0.6
NOLC1-204ENST00000464969 OSCARQ8IYS5 282 aa18.8■□□□□ 0.6
NOLC1-204ENST00000464969 CEP170Q5SW79 1584 aa18.8■□□□□ 0.6
NOLC1-204ENST00000464969 UBTFP17480 764 aaKnown RBP18.78■□□□□ 0.6
NOLC1-204ENST00000464969 GOLGA3Q08378 1498 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms