RNA–Protein interactions for RNA: ENST00000605788.5

NOLC1-209, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NOLC1, Length 3,932 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-209ENST00000605788 NISCHQ9Y2I1 1504 aa17.11■□□□□ 0.33
NOLC1-209ENST00000605788 SHROOM4Q9ULL8 1493 aa15.01□□□□□ -0.01
NOLC1-209ENST00000605788 SUPT5HO00267 1087 aaKnown RBP14.81□□□□□ -0.04
NOLC1-209ENST00000605788 DCAF8L2P0C7V8 631 aa14.5□□□□□ -0.09
NOLC1-209ENST00000605788 ZCCHC6Q5VYS8 1495 aaKnown RBP14.48□□□□□ -0.09
NOLC1-209ENST00000605788 CHIC1Q5VXU3 224 aa14.35□□□□□ -0.11
NOLC1-209ENST00000605788 MYO15BQ96JP2 1530 aa14.32□□□□□ -0.12
NOLC1-209ENST00000605788 CCDC180Q9P1Z9 1646 aa14.31□□□□□ -0.12
NOLC1-209ENST00000605788 HRCP23327 699 aa14.21□□□□□ -0.14
NOLC1-209ENST00000605788 PCGF6Q9BYE7 350 aa14.2□□□□□ -0.14
NOLC1-209ENST00000605788 LOC105371045A0A1W2PR82 267 aa14.05□□□□□ -0.16
NOLC1-209ENST00000605788 PPARGC1BQ86YN6 1023 aaKnown RBP14.02□□□□□ -0.17
NOLC1-209ENST00000605788 DCAF1Q9Y4B6 1507 aa13.9□□□□□ -0.18
NOLC1-209ENST00000605788 TRIM26Q12899 539 aaPredicted RBP13.77□□□□□ -0.21
NOLC1-209ENST00000605788 FAM9AQ8IZU1 332 aaPredicted RBP13.73□□□□□ -0.21
NOLC1-209ENST00000605788 EHMT2Q96KQ7 1210 aa13.71□□□□□ -0.21
NOLC1-209ENST00000605788 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
NOLC1-209ENST00000605788 ABCC9O60706 1549 aa13.68□□□□□ -0.22
NOLC1-209ENST00000605788 SCRIBQ14160 1630 aa13.67□□□□□ -0.22
NOLC1-209ENST00000605788 RSF1Q96T23 1441 aaPredicted RBP13.67□□□□□ -0.22
NOLC1-209ENST00000605788 RB1CC1Q8TDY2 1594 aa13.55□□□□□ -0.24
NOLC1-209ENST00000605788 ZEB1P37275 1124 aaPredicted RBP13.49□□□□□ -0.25
NOLC1-209ENST00000605788 CECR2Q9BXF3 1484 aa13.44□□□□□ -0.26
NOLC1-209ENST00000605788 MROH2BQ7Z745 1585 aa13.37□□□□□ -0.27
NOLC1-209ENST00000605788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.3□□□□□ -0.28
NOLC1-209ENST00000605788 TTBK1Q5TCY1 1321 aaPredicted RBP13.29□□□□□ -0.28
NOLC1-209ENST00000605788 WIZO95785 1651 aa13.29□□□□□ -0.28
NOLC1-209ENST00000605788 NACADO15069 1562 aa13.27□□□□□ -0.29
NOLC1-209ENST00000605788 CCER1Q8TC90 406 aaPredicted RBP13.25□□□□□ -0.29
NOLC1-209ENST00000605788 SCAF1Q9H7N4 1312 aaKnown RBP13.24□□□□□ -0.29
NOLC1-209ENST00000605788 BAZ1AQ9NRL2 1556 aaPredicted RBP13.14□□□□□ -0.31
NOLC1-209ENST00000605788 ABCC8Q09428 1581 aa13.12□□□□□ -0.31
NOLC1-209ENST00000605788 CCDC88BA6NC98 1476 aa13.1□□□□□ -0.31
NOLC1-209ENST00000605788 EIF4G1Q04637 1599 aaKnown RBP13.07□□□□□ -0.32
NOLC1-209ENST00000605788 UBTFP17480 764 aaKnown RBP13.07□□□□□ -0.32
NOLC1-209ENST00000605788 SOGA1O94964 1423 aa13.06□□□□□ -0.32
NOLC1-209ENST00000605788 DIEXFQ68CQ4 756 aaKnown RBP13.05□□□□□ -0.32
NOLC1-209ENST00000605788 CEP162Q5TB80 1403 aa13.05□□□□□ -0.32
NOLC1-209ENST00000605788 PELP1Q8IZL8 1130 aaKnown RBP13.05□□□□□ -0.32
NOLC1-209ENST00000605788 NEUROD1Q13562 356 aa13.04□□□□□ -0.32
NOLC1-209ENST00000605788 ACIN1Q9UKV3 1341 aaKnown RBP13.03□□□□□ -0.32
NOLC1-209ENST00000605788 TOP2AP11388 1531 aaKnown RBP13.02□□□□□ -0.33
NOLC1-209ENST00000605788 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
NOLC1-209ENST00000605788 RUSC2Q8N2Y8 1516 aa12.99□□□□□ -0.33
NOLC1-209ENST00000605788 SMARCA2P51531 1590 aa12.98□□□□□ -0.33
NOLC1-209ENST00000605788 WRNQ14191 1432 aaPredicted RBP eCLIP12.98□□□□□ -0.33
NOLC1-209ENST00000605788 SMARCA4P51532 1647 aa12.98□□□□□ -0.33
NOLC1-209ENST00000605788 TNIKQ9UKE5 1360 aa12.97□□□□□ -0.33
NOLC1-209ENST00000605788 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
NOLC1-209ENST00000605788 GTF3C3Q9Y5Q9 886 aa12.94□□□□□ -0.34
NOLC1-209ENST00000605788 CENPBP07199 599 aaPredicted RBP12.93□□□□□ -0.34
NOLC1-209ENST00000605788 HNRNPUL2Q1KMD3 747 aaKnown RBP12.92□□□□□ -0.34
NOLC1-209ENST00000605788 RANGAP1P46060 587 aaPredicted RBP12.9□□□□□ -0.34
NOLC1-209ENST00000605788 YTHDC1Q96MU7 727 aaKnown RBP12.88□□□□□ -0.35
NOLC1-209ENST00000605788 ZNF316A6NFI3 1004 aaPredicted RBP12.87□□□□□ -0.35
NOLC1-209ENST00000605788 EEA1Q15075 1411 aa12.87□□□□□ -0.35
NOLC1-209ENST00000605788 GOLGA3Q08378 1498 aa12.87□□□□□ -0.35
NOLC1-209ENST00000605788 UNC13AQ9UPW8 1703 aa12.82□□□□□ -0.36
NOLC1-209ENST00000605788 APLP2Q06481 763 aa12.79□□□□□ -0.36
NOLC1-209ENST00000605788 CLIP1P30622 1438 aa12.78□□□□□ -0.36
NOLC1-209ENST00000605788 MIER1Q8N108 512 aa12.76□□□□□ -0.37
NOLC1-209ENST00000605788 CEP164Q9UPV0 1460 aa12.76□□□□□ -0.37
NOLC1-209ENST00000605788 SYNJ1O43426 1573 aa12.74□□□□□ -0.37
NOLC1-209ENST00000605788 RAPGEF2Q9Y4G8 1499 aa12.7□□□□□ -0.38
NOLC1-209ENST00000605788 BICRAQ9NZM4 1560 aa12.7□□□□□ -0.38
NOLC1-209ENST00000605788 VPS8Q8N3P4 1428 aa12.7□□□□□ -0.38
NOLC1-209ENST00000605788 KIF21BO75037 1637 aa12.66□□□□□ -0.38
NOLC1-209ENST00000605788 BAZ1BQ9UIG0 1483 aaKnown RBP12.65□□□□□ -0.38
NOLC1-209ENST00000605788 ATAD2BQ9ULI0 1458 aa12.65□□□□□ -0.38
NOLC1-209ENST00000605788 PEG3Q9GZU2 1588 aa12.63□□□□□ -0.39
NOLC1-209ENST00000605788 KANK4Q5T7N3 995 aaPredicted RBP12.58□□□□□ -0.39
NOLC1-209ENST00000605788 ITGAEP38570 1179 aa12.56□□□□□ -0.4
NOLC1-209ENST00000605788 DHX57Q6P158 1386 aaKnown RBP12.53□□□□□ -0.4
NOLC1-209ENST00000605788 TOP2BQ02880 1626 aa12.51□□□□□ -0.41
NOLC1-209ENST00000605788 ARAP1Q96P48 1450 aa12.5□□□□□ -0.41
NOLC1-209ENST00000605788 PRXQ9BXM0 1461 aa12.48□□□□□ -0.41
NOLC1-209ENST00000605788 CLSPNQ9HAW4 1339 aa12.47□□□□□ -0.41
NOLC1-209ENST00000605788 ERICH3Q5RHP9 1530 aa12.43□□□□□ -0.42
NOLC1-209ENST00000605788 KIF27Q86VH2 1401 aa12.43□□□□□ -0.42
NOLC1-209ENST00000605788 BIVM-ERCC5R4GMW8 1640 aa12.42□□□□□ -0.42
NOLC1-209ENST00000605788 CUX1P39880 1505 aa12.41□□□□□ -0.42
NOLC1-209ENST00000605788 CCNB3Q8WWL7 1395 aa12.41□□□□□ -0.42
NOLC1-209ENST00000605788 RRBP1Q9P2E9 1410 aaKnown RBP12.39□□□□□ -0.43
NOLC1-209ENST00000605788 SUPT16HQ9Y5B9 1047 aaKnown RBP12.39□□□□□ -0.43
NOLC1-209ENST00000605788 MYT1Q01538 1121 aa12.38□□□□□ -0.43
NOLC1-209ENST00000605788 ARHGAP35Q9NRY4 1499 aa12.38□□□□□ -0.43
NOLC1-209ENST00000605788 KCNH8Q96L42 1107 aa12.37□□□□□ -0.43
NOLC1-209ENST00000605788 ATP1B4Q9UN42 357 aaPredicted RBP12.36□□□□□ -0.43
NOLC1-209ENST00000605788 RAB3GAP2Q9H2M9 1393 aa12.34□□□□□ -0.43
NOLC1-209ENST00000605788 P3H3Q8IVL6 736 aa12.34□□□□□ -0.43
NOLC1-209ENST00000605788 FAM50AQ14320 339 aaKnown RBP12.34□□□□□ -0.43
NOLC1-209ENST00000605788 NCAPD3P42695 1498 aa12.33□□□□□ -0.44
NOLC1-209ENST00000605788 CUX2O14529 1486 aa12.32□□□□□ -0.44
NOLC1-209ENST00000605788 SIN3AQ96ST3 1273 aa12.31□□□□□ -0.44
NOLC1-209ENST00000605788 CFTRP13569 1480 aa12.3□□□□□ -0.44
NOLC1-209ENST00000605788 IGF1RP08069 1367 aa12.3□□□□□ -0.44
NOLC1-209ENST00000605788 DDX10Q13206 875 aaKnown RBP12.3□□□□□ -0.44
NOLC1-209ENST00000605788 HMGXB3Q12766 1538 aa12.28□□□□□ -0.44
NOLC1-209ENST00000605788 HIRIP3Q9BW71 556 aaPredicted RBP12.28□□□□□ -0.44
NOLC1-209ENST00000605788 BCANQ96GW7 911 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms