Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 SEC31A-227ENST00000508502 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.932e-7■□□□□ 9.9
LSM11P83369 SEC31A-216ENST00000505479 631 ntTSL 29.04□□□□□ -0.962e-7■□□□□ 9.9
LSM11P83369 SEC31A-240ENST00000515062 597 ntTSL 38.94□□□□□ -0.982e-7■□□□□ 9.9
LSM11P83369 MRPS5-208ENST00000482821 3680 ntTSL 28.51□□□□□ -1.052e-7■□□□□ 9.9
LSM11P83369 EHBP1-219ENST00000494958 1127 ntTSL 1 (best)8.35□□□□□ -1.073e-6■□□□□ 9.9
LSM11P83369 LPAR6-203ENST00000462781 356 ntTSL 58.27□□□□□ -1.092e-7■□□□□ 9.9
LSM11P83369 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.152e-7■□□□□ 9.9
LSM11P83369 LPAR6-206ENST00000470937 442 ntTSL 57.71□□□□□ -1.182e-7■□□□□ 9.9
LSM11P83369 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.272e-7■□□□□ 9.9
LSM11P83369 LPAR6-205ENST00000465365 1651 ntTSL 1 (best)7.07□□□□□ -1.282e-7■□□□□ 9.9
LSM11P83369 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.74□□□□□ -1.333e-6■□□□□ 9.9
LSM11P83369 EHBP1-208ENST00000427809 581 ntTSL 46.69□□□□□ -1.343e-6■□□□□ 9.9
LSM11P83369 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.432e-7■□□□□ 9.9
LSM11P83369 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.92□□□□□ -1.622e-7■□□□□ 9.9
LSM11P83369 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.78□□□□□ -1.642e-7■□□□□ 9.9
LSM11P83369 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.673e-6■□□□□ 9.9
LSM11P83369 SCARNA9-201ENST00000530422 353 ntBASIC11.76□□□□□ -0.531e-323■□□□□ 9.9
LSM11P83369 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.591e-323■□□□□ 9.9
LSM11P83369 CEP295-203ENST00000530425 1735 ntAPPRIS ALT2 TSL 45□□□□□ -1.611e-323■□□□□ 9.9
LSM11P83369 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.731e-323■□□□□ 9.9
LSM11P83369 snoU2-30.2-201ENST00000362805 70 ntBASIC4.07□□□□□ -1.761e-323■□□□□ 9.9
LSM11P83369 SUPT5H-209ENST00000596208 323 ntTSL 25.26□□□□□ -1.572e-6■□□□□ 9.9
LSM11P83369 ARF1-209ENST00000478424 1059 ntTSL 221.61■■□□□ 1.052e-6■□□□□ 9.9
LSM11P83369 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.92e-6■□□□□ 9.9
LSM11P83369 ARF1-206ENST00000473949 578 ntTSL 518.07■□□□□ 0.482e-6■□□□□ 9.9
LSM11P83369 ARF1-203ENST00000470558 820 ntTSL 213.78□□□□□ -0.22e-6■□□□□ 9.9
LSM11P83369 ARF1-204ENST00000470670 712 ntTSL 312.74□□□□□ -0.372e-6■□□□□ 9.9
LSM11P83369 ARF1-201ENST00000272102 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.862e-6■□□□□ 9.9
LSM11P83369 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.75■□□□□ 0.434e-8■□□□□ 9.9
LSM11P83369 RBM5-213ENST00000464988 877 ntTSL 28.51□□□□□ -1.051e-6■□□□□ 9.9
LSM11P83369 FTL-201ENST00000331825 878 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.658e-13■□□□□ 9.9
LSM11P83369 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.3□□□□□ -0.441e-6■□□□□ 9.9
LSM11P83369 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC11.07□□□□□ -0.641e-6■□□□□ 9.9
LSM11P83369 SNHG1-206ENST00000537925 1487 ntTSL 1 (best) BASIC10.3□□□□□ -0.761e-6■□□□□ 9.9
LSM11P83369 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC10.13□□□□□ -0.791e-6■□□□□ 9.9
LSM11P83369 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC9.85□□□□□ -0.831e-6■□□□□ 9.9
LSM11P83369 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC8.81□□□□□ -11e-6■□□□□ 9.9
LSM11P83369 SNHG1-209ENST00000538654 2768 ntTSL 28.38□□□□□ -1.071e-6■□□□□ 9.9
LSM11P83369 SNHG1-201ENST00000535076 849 ntTSL 28.05□□□□□ -1.121e-6■□□□□ 9.9
LSM11P83369 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.36□□□□□ -1.391e-6■□□□□ 9.9
LSM11P83369 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.11□□□□□ -1.431e-6■□□□□ 9.9
LSM11P83369 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.97□□□□□ -1.451e-6■□□□□ 9.9
LSM11P83369 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.77□□□□□ -1.491e-6■□□□□ 9.9
LSM11P83369 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.629e-11■□□□□ 9.9
LSM11P83369 DDX39B-221ENST00000484566 857 ntTSL 511.18□□□□□ -0.629e-11■□□□□ 9.9
LSM11P83369 DDX39B-214ENST00000458640 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.769e-11■□□□□ 9.9
LSM11P83369 DDX39B-201ENST00000376177 1529 ntTSL 5 BASIC9.64□□□□□ -0.879e-11■□□□□ 9.9
LSM11P83369 DDX39B-202ENST00000396172 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.999e-11■□□□□ 9.9
LSM11P83369 DDX39B-215ENST00000462256 4027 ntTSL 28.05□□□□□ -1.129e-11■□□□□ 9.9
LSM11P83369 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.63e-6■□□□□ 9.9
LSM11P83369 AIG1-207ENST00000470265 572 ntTSL 28.13□□□□□ -1.113e-14■□□□□ 9.9
LSM11P83369 NEDD4L-224ENST00000588712 2066 ntTSL 29.57□□□□□ -0.881e-9■□□□□ 9.9
LSM11P83369 NEDD4L-229ENST00000590506 2743 ntTSL 27.24□□□□□ -1.251e-9■□□□□ 9.9
LSM11P83369 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.66■□□□□ 0.92e-6■□□□□ 9.8
LSM11P83369 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.62e-6■□□□□ 9.8
LSM11P83369 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.562e-6■□□□□ 9.8
LSM11P83369 KCNH2-204ENST00000461280 2430 ntTSL 1 (best)18.35■□□□□ 0.532e-6■□□□□ 9.8
LSM11P83369 RPL8-203ENST00000525232 1007 ntTSL 1 (best)18.2■□□□□ 0.52e-6■□□□□ 9.8
LSM11P83369 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.16■□□□□ 0.52e-6■□□□□ 9.8
LSM11P83369 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.39■□□□□ 0.372e-6■□□□□ 9.8
LSM11P83369 KCNH2-205ENST00000473610 2782 ntTSL 217.19■□□□□ 0.342e-6■□□□□ 9.8
LSM11P83369 KCNH2-206ENST00000532957 3374 ntTSL 217.11■□□□□ 0.332e-6■□□□□ 9.8
LSM11P83369 TPM4-208ENST00000588410 563 ntTSL 416.9■□□□□ 0.32e-6■□□□□ 9.8
LSM11P83369 TPM4-204ENST00000586499 708 ntTSL 416.59■□□□□ 0.252e-6■□□□□ 9.8
LSM11P83369 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.45■□□□□ 0.222e-6■□□□□ 9.8
LSM11P83369 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.132e-6■□□□□ 9.8
LSM11P83369 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.082e-6■□□□□ 9.8
LSM11P83369 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.042e-6■□□□□ 9.8
LSM11P83369 TPM4-206ENST00000587201 877 ntTSL 215.3■□□□□ 0.042e-6■□□□□ 9.8
LSM11P83369 RPL8-209ENST00000529920 876 ntTSL 215.01□□□□□ -0.012e-6■□□□□ 9.8
LSM11P83369 RPL8-206ENST00000528296 540 ntTSL 314.91□□□□□ -0.022e-6■□□□□ 9.8
LSM11P83369 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.81□□□□□ -0.042e-6■□□□□ 9.8
LSM11P83369 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.12e-6■□□□□ 9.8
LSM11P83369 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.36□□□□□ -0.112e-6■□□□□ 9.8
LSM11P83369 SCAP-207ENST00000441517 3748 ntTSL 214.36□□□□□ -0.112e-6■□□□□ 9.8
LSM11P83369 RPL8-213ENST00000533397 730 ntTSL 214.26□□□□□ -0.132e-6■□□□□ 9.8
LSM11P83369 RPL8-204ENST00000526668 717 ntTSL 1 (best)14.13□□□□□ -0.152e-6■□□□□ 9.8
LSM11P83369 SCAP-202ENST00000320017 3430 ntTSL 214.03□□□□□ -0.162e-6■□□□□ 9.8
LSM11P83369 RPL8-210ENST00000531767 570 ntTSL 513.58□□□□□ -0.242e-6■□□□□ 9.8
LSM11P83369 EIF3G-207ENST00000589009 1522 ntTSL 213.56□□□□□ -0.242e-6■□□□□ 9.8
LSM11P83369 RPL8-212ENST00000532702 745 ntTSL 213.55□□□□□ -0.242e-6■□□□□ 9.8
LSM11P83369 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.17□□□□□ -0.32e-6■□□□□ 9.8
LSM11P83369 TPM4-205ENST00000586833 558 ntTSL 512.35□□□□□ -0.432e-6■□□□□ 9.8
LSM11P83369 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.432e-6■□□□□ 9.8
LSM11P83369 SNHG4-203ENST00000506188 801 ntTSL 412.1□□□□□ -0.473e-6■□□□□ 9.8
LSM11P83369 EIF3G-206ENST00000588709 828 ntTSL 512.07□□□□□ -0.482e-6■□□□□ 9.8
LSM11P83369 EIF3G-202ENST00000587146 709 ntTSL 511.22□□□□□ -0.612e-6■□□□□ 9.8
LSM11P83369 RPL8-211ENST00000531975 698 ntTSL 310.68□□□□□ -0.72e-6■□□□□ 9.8
LSM11P83369 RPL8-208ENST00000529163 556 ntTSL 210.02□□□□□ -0.812e-6■□□□□ 9.8
LSM11P83369 EIF3G-208ENST00000589454 873 ntTSL 59.36□□□□□ -0.912e-6■□□□□ 9.8
LSM11P83369 NEK2-204ENST00000489633 661 ntTSL 29.07□□□□□ -0.962e-6■□□□□ 9.8
LSM11P83369 NEK2-203ENST00000462283 801 ntTSL 27.63□□□□□ -1.192e-6■□□□□ 9.8
LSM11P83369 TPM4-210ENST00000588507 367 ntTSL 36.44□□□□□ -1.382e-6■□□□□ 9.8
LSM11P83369 MLXIPL-209ENST00000467221 774 ntTSL 59.95□□□□□ -0.823e-13■□□□□ 9.8
LSM11P83369 RBM39-217ENST00000448303 1008 ntTSL 58.36□□□□□ -1.073e-13■□□□□ 9.8
LSM11P83369 MAN2C1-233ENST00000566569 848 ntTSL 513.37□□□□□ -0.272e-7■□□□□ 9.8
LSM11P83369 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.359e-11■□□□□ 9.8
LSM11P83369 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.29e-11■□□□□ 9.8
LSM11P83369 CHKB-203ENST00000464225 624 ntTSL 28.68□□□□□ -1.021e-6■□□□□ 9.8
LSM11P83369 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.251e-10■□□□□ 9.8
Retrieved 100 of 11,495 protein–RNA pairs in 51.2 ms