RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 NISCHQ9Y2I1 1504 aa13.99□□□□□ -0.17
NEDD4L-229ENST00000590506 CHIC1Q5VXU3 224 aa13.49□□□□□ -0.25
NEDD4L-229ENST00000590506 HRCP23327 699 aa13.21□□□□□ -0.29
NEDD4L-229ENST00000590506 PELP1Q8IZL8 1130 aaKnown RBP13.11□□□□□ -0.31
NEDD4L-229ENST00000590506 PPARGC1BQ86YN6 1023 aaKnown RBP12.99□□□□□ -0.33
NEDD4L-229ENST00000590506 AEBP2Q6ZN18 517 aaPredicted RBP12.91□□□□□ -0.34
NEDD4L-229ENST00000590506 PCGF6Q9BYE7 350 aa12.83□□□□□ -0.36
NEDD4L-229ENST00000590506 SCAF1Q9H7N4 1312 aaKnown RBP12.68□□□□□ -0.38
NEDD4L-229ENST00000590506 MYT1Q01538 1121 aa12.67□□□□□ -0.38
NEDD4L-229ENST00000590506 MYO15BQ96JP2 1530 aa12.6□□□□□ -0.39
NEDD4L-229ENST00000590506 SUPT5HO00267 1087 aaKnown RBP12.55□□□□□ -0.4
NEDD4L-229ENST00000590506 SHROOM4Q9ULL8 1493 aa12.51□□□□□ -0.41
NEDD4L-229ENST00000590506 SLC24A1O60721 1099 aa12.5□□□□□ -0.41
NEDD4L-229ENST00000590506 EHMT2Q96KQ7 1210 aa12.37□□□□□ -0.43
NEDD4L-229ENST00000590506 DCAF1Q9Y4B6 1507 aa12.33□□□□□ -0.43
NEDD4L-229ENST00000590506 TRIM26Q12899 539 aaPredicted RBP12.3□□□□□ -0.44
NEDD4L-229ENST00000590506 ZEB1P37275 1124 aaPredicted RBP12.26□□□□□ -0.45
NEDD4L-229ENST00000590506 ACIN1Q9UKV3 1341 aaKnown RBP12.26□□□□□ -0.45
NEDD4L-229ENST00000590506 CCDC180Q9P1Z9 1646 aa12.25□□□□□ -0.45
NEDD4L-229ENST00000590506 NEUROD1Q13562 356 aa12.23□□□□□ -0.45
NEDD4L-229ENST00000590506 PHF23Q9BUL5 403 aaPredicted RBP12.22□□□□□ -0.45
NEDD4L-229ENST00000590506 LOC105371045A0A1W2PR82 267 aa12.2□□□□□ -0.46
NEDD4L-229ENST00000590506 GTF3C3Q9Y5Q9 886 aa12.2□□□□□ -0.46
NEDD4L-229ENST00000590506 CENPBP07199 599 aaPredicted RBP12.04□□□□□ -0.48
NEDD4L-229ENST00000590506 TTBK1Q5TCY1 1321 aaPredicted RBP11.93□□□□□ -0.5
NEDD4L-229ENST00000590506 BCL11AQ9H165 835 aa11.91□□□□□ -0.5
NEDD4L-229ENST00000590506 ZCCHC6Q5VYS8 1495 aaKnown RBP11.9□□□□□ -0.5
NEDD4L-229ENST00000590506 DIEXFQ68CQ4 756 aaKnown RBP11.9□□□□□ -0.5
NEDD4L-229ENST00000590506 PLPPR3Q6T4P5 718 aa11.87□□□□□ -0.51
NEDD4L-229ENST00000590506 FAM9AQ8IZU1 332 aaPredicted RBP11.83□□□□□ -0.52
NEDD4L-229ENST00000590506 YTHDC1Q96MU7 727 aaKnown RBP11.8□□□□□ -0.52
NEDD4L-229ENST00000590506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.8□□□□□ -0.52
NEDD4L-229ENST00000590506 DCAF8L2P0C7V8 631 aa11.77□□□□□ -0.53
NEDD4L-229ENST00000590506 CCER1Q8TC90 406 aaPredicted RBP11.76□□□□□ -0.53
NEDD4L-229ENST00000590506 ANP32EQ9BTT0 268 aa11.71□□□□□ -0.53
NEDD4L-229ENST00000590506 TRIM41Q8WV44 630 aa11.66□□□□□ -0.54
NEDD4L-229ENST00000590506 RTN4Q9NQC3 1192 aaKnown RBP11.66□□□□□ -0.54
NEDD4L-229ENST00000590506 PRKCSHP14314 528 aaPredicted RBP11.63□□□□□ -0.55
NEDD4L-229ENST00000590506 CSRNP3Q8WYN3 585 aa11.62□□□□□ -0.55
NEDD4L-229ENST00000590506 ZNF316A6NFI3 1004 aaPredicted RBP11.59□□□□□ -0.55
NEDD4L-229ENST00000590506 MIER1Q8N108 512 aa11.59□□□□□ -0.55
NEDD4L-229ENST00000590506 KCNA4P22459 653 aa11.58□□□□□ -0.56
NEDD4L-229ENST00000590506 TSHZ2Q9NRE2 1034 aa11.56□□□□□ -0.56
NEDD4L-229ENST00000590506 SUPT16HQ9Y5B9 1047 aaKnown RBP11.52□□□□□ -0.56
NEDD4L-229ENST00000590506 CLSPNQ9HAW4 1339 aa11.4□□□□□ -0.58
NEDD4L-229ENST00000590506 ABCC9O60706 1549 aa11.31□□□□□ -0.6
NEDD4L-229ENST00000590506 ERICH6Q7L0X2 663 aa11.3□□□□□ -0.6
NEDD4L-229ENST00000590506 BCANQ96GW7 911 aa11.3□□□□□ -0.6
NEDD4L-229ENST00000590506 RSF1Q96T23 1441 aaPredicted RBP11.29□□□□□ -0.6
NEDD4L-229ENST00000590506 AMER1Q5JTC6 1135 aaPredicted RBP11.29□□□□□ -0.6
NEDD4L-229ENST00000590506 RBM19Q9Y4C8 960 aaKnown RBP11.25□□□□□ -0.61
NEDD4L-229ENST00000590506 RB1CC1Q8TDY2 1594 aa11.24□□□□□ -0.61
NEDD4L-229ENST00000590506 MSH5O43196 834 aa11.2□□□□□ -0.62
NEDD4L-229ENST00000590506 FKBP8Q14318 412 aa11.18□□□□□ -0.62
NEDD4L-229ENST00000590506 APLP2Q06481 763 aa11.17□□□□□ -0.62
NEDD4L-229ENST00000590506 ANO8Q9HCE9 1232 aaPredicted RBP11.16□□□□□ -0.62
NEDD4L-229ENST00000590506 HNRNPUL2Q1KMD3 747 aaKnown RBP11.16□□□□□ -0.62
NEDD4L-229ENST00000590506 WRNQ14191 1432 aaPredicted RBP eCLIP11.15□□□□□ -0.62
NEDD4L-229ENST00000590506 ITGAEP38570 1179 aa11.12□□□□□ -0.63
NEDD4L-229ENST00000590506 NCBP3Q53F19 620 aaKnown RBP11.12□□□□□ -0.63
NEDD4L-229ENST00000590506 KCNH8Q96L42 1107 aa11.1□□□□□ -0.63
NEDD4L-229ENST00000590506 SCRIBQ14160 1630 aa11.09□□□□□ -0.63
NEDD4L-229ENST00000590506 DEKP35659 375 aaKnown RBP11.08□□□□□ -0.64
NEDD4L-229ENST00000590506 CEP162Q5TB80 1403 aa11.08□□□□□ -0.64
NEDD4L-229ENST00000590506 SLC4A1APQ9BWU0 796 aaKnown RBP11.08□□□□□ -0.64
NEDD4L-229ENST00000590506 NEFLP07196 543 aa11.04□□□□□ -0.64
NEDD4L-229ENST00000590506 SALL2Q9Y467 1007 aaPredicted RBP11.02□□□□□ -0.65
NEDD4L-229ENST00000590506 FANCIQ9NVI1 1328 aa11.02□□□□□ -0.65
NEDD4L-229ENST00000590506 ADRA2BP18089 450 aa11.01□□□□□ -0.65
NEDD4L-229ENST00000590506 MYT1LQ9UL68 1186 aa11□□□□□ -0.65
NEDD4L-229ENST00000590506 CCDC136Q96JN2 1154 aa10.98□□□□□ -0.65
NEDD4L-229ENST00000590506 CECR2Q9BXF3 1484 aa10.96□□□□□ -0.65
NEDD4L-229ENST00000590506 TNIKQ9UKE5 1360 aa10.95□□□□□ -0.66
NEDD4L-229ENST00000590506 UBTFP17480 764 aaKnown RBP10.94□□□□□ -0.66
NEDD4L-229ENST00000590506 MROH2BQ7Z745 1585 aa10.94□□□□□ -0.66
NEDD4L-229ENST00000590506 DAXXQ9UER7 740 aaPredicted RBP10.93□□□□□ -0.66
NEDD4L-229ENST00000590506 CDK11AQ9UQ88 783 aaPredicted RBP10.92□□□□□ -0.66
NEDD4L-229ENST00000590506 NBR1Q14596 966 aa10.91□□□□□ -0.66
NEDD4L-229ENST00000590506 WIZO95785 1651 aa10.9□□□□□ -0.66
NEDD4L-229ENST00000590506 TRIM52Q96A61 297 aa10.9□□□□□ -0.66
NEDD4L-229ENST00000590506 CCDC88BA6NC98 1476 aa10.9□□□□□ -0.66
NEDD4L-229ENST00000590506 DHX57Q6P158 1386 aaKnown RBP10.9□□□□□ -0.66
NEDD4L-229ENST00000590506 ABCC8Q09428 1581 aa10.89□□□□□ -0.67
NEDD4L-229ENST00000590506 ERICH6BQ5W0A0 696 aa10.89□□□□□ -0.67
NEDD4L-229ENST00000590506 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.88□□□□□ -0.67
NEDD4L-229ENST00000590506 SOGA1O94964 1423 aa10.88□□□□□ -0.67
NEDD4L-229ENST00000590506 UBE2Q2Q8WVN8 375 aa10.86□□□□□ -0.67
NEDD4L-229ENST00000590506 IRX6P78412 446 aaPredicted RBP10.86□□□□□ -0.67
NEDD4L-229ENST00000590506 EIF4G1Q04637 1599 aaKnown RBP10.86□□□□□ -0.67
NEDD4L-229ENST00000590506 IL27Q8NEV9 243 aa10.85□□□□□ -0.67
NEDD4L-229ENST00000590506 DDX10Q13206 875 aaKnown RBP10.85□□□□□ -0.67
NEDD4L-229ENST00000590506 NOP58Q9Y2X3 529 aaKnown RBP10.81□□□□□ -0.68
NEDD4L-229ENST00000590506 BAZ1AQ9NRL2 1556 aaPredicted RBP10.81□□□□□ -0.68
NEDD4L-229ENST00000590506 PAK3O75914 559 aaPredicted RBP10.81□□□□□ -0.68
NEDD4L-229ENST00000590506 RUSC2Q8N2Y8 1516 aa10.8□□□□□ -0.68
NEDD4L-229ENST00000590506 EEA1Q15075 1411 aa10.79□□□□□ -0.68
NEDD4L-229ENST00000590506 GOLGA3Q08378 1498 aa10.79□□□□□ -0.68
NEDD4L-229ENST00000590506 ZBTB22O15209 634 aa10.78□□□□□ -0.68
NEDD4L-229ENST00000590506 NACADO15069 1562 aa10.76□□□□□ -0.69
NEDD4L-229ENST00000590506 RTL5Q5HYW3 569 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms