Protein–RNA interactions for Protein: P47224

RABIF, Guanine nucleotide exchange factor MSS4, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABIFP47224 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RABIFP47224 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RABIFP47224 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RABIFP47224 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RABIFP47224 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.49■□□□□ 0.55
RABIFP47224 AC008556.1-201ENST00000610908 2040 ntBASIC18.49■□□□□ 0.55
RABIFP47224 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RABIFP47224 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.49■□□□□ 0.55
RABIFP47224 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RABIFP47224 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RABIFP47224 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RABIFP47224 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RABIFP47224 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
RABIFP47224 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RABIFP47224 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RABIFP47224 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RABIFP47224 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RABIFP47224 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.48■□□□□ 0.55
RABIFP47224 KRT8P32-201ENST00000512863 1461 ntBASIC18.48■□□□□ 0.55
RABIFP47224 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
RABIFP47224 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RABIFP47224 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RABIFP47224 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RABIFP47224 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RABIFP47224 AL645929.1-201ENST00000420084 975 ntBASIC18.48■□□□□ 0.55
RABIFP47224 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RABIFP47224 SPDYE13P-201ENST00000445314 798 ntBASIC18.48■□□□□ 0.55
RABIFP47224 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RABIFP47224 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.48■□□□□ 0.55
RABIFP47224 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RABIFP47224 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RABIFP47224 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RABIFP47224 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RABIFP47224 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.48■□□□□ 0.55
RABIFP47224 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.48■□□□□ 0.55
RABIFP47224 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.47■□□□□ 0.55
RABIFP47224 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RABIFP47224 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RABIFP47224 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RABIFP47224 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RABIFP47224 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RABIFP47224 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RABIFP47224 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RABIFP47224 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.47■□□□□ 0.55
RABIFP47224 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RABIFP47224 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RABIFP47224 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RABIFP47224 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RABIFP47224 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RABIFP47224 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RABIFP47224 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.47■□□□□ 0.55
RABIFP47224 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RABIFP47224 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.47■□□□□ 0.55
RABIFP47224 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RABIFP47224 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.47■□□□□ 0.55
RABIFP47224 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.47■□□□□ 0.55
RABIFP47224 KRT18P23-201ENST00000435622 1283 ntBASIC18.47■□□□□ 0.55
RABIFP47224 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
RABIFP47224 MIR3917-201ENST00000580971 93 ntBASIC18.47■□□□□ 0.55
RABIFP47224 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.47■□□□□ 0.55
RABIFP47224 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.47■□□□□ 0.55
RABIFP47224 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RABIFP47224 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RABIFP47224 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RABIFP47224 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RABIFP47224 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.47■□□□□ 0.55
RABIFP47224 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RABIFP47224 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RABIFP47224 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RABIFP47224 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.46■□□□□ 0.55
RABIFP47224 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RABIFP47224 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RABIFP47224 MIR564-202ENST00000385049 94 ntBASIC18.46■□□□□ 0.55
RABIFP47224 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.46■□□□□ 0.55
RABIFP47224 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.46■□□□□ 0.55
RABIFP47224 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.46■□□□□ 0.55
RABIFP47224 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.46■□□□□ 0.55
RABIFP47224 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.46■□□□□ 0.55
RABIFP47224 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
RABIFP47224 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.46■□□□□ 0.55
RABIFP47224 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RABIFP47224 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RABIFP47224 HOXB1-202ENST00000577092 1414 ntBASIC18.46■□□□□ 0.55
RABIFP47224 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RABIFP47224 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RABIFP47224 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RABIFP47224 AL158211.5-201ENST00000623583 2518 ntBASIC18.46■□□□□ 0.55
RABIFP47224 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RABIFP47224 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RABIFP47224 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RABIFP47224 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.45■□□□□ 0.54
RABIFP47224 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RABIFP47224 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RABIFP47224 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
RABIFP47224 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RABIFP47224 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
RABIFP47224 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RABIFP47224 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.45■□□□□ 0.54
RABIFP47224 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.45■□□□□ 0.54
RABIFP47224 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms