Protein–RNA interactions for Protein: P16035

TIMP2, Metalloproteinase inhibitor 2, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2P16035 AC068587.9-201ENST00000641814 219 ntBASIC18.81■□□□□ 0.6
TIMP2P16035 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMP2P16035 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMP2P16035 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMP2P16035 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TIMP2P16035 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TIMP2P16035 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TIMP2P16035 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMP2P16035 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TIMP2P16035 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TIMP2P16035 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TIMP2P16035 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.81■□□□□ 0.6
TIMP2P16035 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP2P16035 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP2P16035 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.8■□□□□ 0.6
TIMP2P16035 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP2P16035 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP2P16035 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP2P16035 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.8■□□□□ 0.6
TIMP2P16035 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP2P16035 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP2P16035 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.8■□□□□ 0.6
TIMP2P16035 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP2P16035 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.8■□□□□ 0.6
TIMP2P16035 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP2P16035 MIR564-202ENST00000385049 94 ntBASIC18.8■□□□□ 0.6
TIMP2P16035 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TIMP2P16035 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.8■□□□□ 0.6
TIMP2P16035 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.8■□□□□ 0.6
TIMP2P16035 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP2P16035 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP2P16035 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.8■□□□□ 0.6
TIMP2P16035 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
TIMP2P16035 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TIMP2P16035 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP2P16035 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP2P16035 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP2P16035 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.8■□□□□ 0.6
TIMP2P16035 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
TIMP2P16035 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TIMP2P16035 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TIMP2P16035 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.8■□□□□ 0.6
TIMP2P16035 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TIMP2P16035 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.8■□□□□ 0.6
TIMP2P16035 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.8■□□□□ 0.6
TIMP2P16035 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TIMP2P16035 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TIMP2P16035 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP2P16035 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.79■□□□□ 0.6
TIMP2P16035 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP2P16035 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TIMP2P16035 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP2P16035 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.79■□□□□ 0.6
TIMP2P16035 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.79■□□□□ 0.6
TIMP2P16035 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.79■□□□□ 0.6
TIMP2P16035 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.79■□□□□ 0.6
TIMP2P16035 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.79■□□□□ 0.6
TIMP2P16035 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.79■□□□□ 0.6
TIMP2P16035 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP2P16035 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.79■□□□□ 0.6
TIMP2P16035 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP2P16035 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.79■□□□□ 0.6
TIMP2P16035 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP2P16035 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP2P16035 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TIMP2P16035 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TIMP2P16035 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP2P16035 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.79■□□□□ 0.6
TIMP2P16035 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP2P16035 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TIMP2P16035 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP2P16035 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TIMP2P16035 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP2P16035 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP2P16035 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP2P16035 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP2P16035 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP2P16035 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.78■□□□□ 0.6
TIMP2P16035 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.78■□□□□ 0.6
TIMP2P16035 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP2P16035 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP2P16035 AC092647.4-201ENST00000457211 535 ntBASIC18.78■□□□□ 0.6
TIMP2P16035 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.78■□□□□ 0.6
TIMP2P16035 LINC01238-205ENST00000567549 1107 ntBASIC18.78■□□□□ 0.6
TIMP2P16035 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TIMP2P16035 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.78■□□□□ 0.6
TIMP2P16035 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.78■□□□□ 0.6
TIMP2P16035 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP2P16035 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP2P16035 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
TIMP2P16035 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP2P16035 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP2P16035 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP2P16035 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP2P16035 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP2P16035 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP2P16035 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TIMP2P16035 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.77■□□□□ 0.6
TIMP2P16035 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TIMP2P16035 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms