Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSF1P09603 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSF1P09603 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.31■□□□□ 0.2
CSF1P09603 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSF1P09603 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSF1P09603 ESRRAP1-201ENST00000400596 1257 ntBASIC16.31■□□□□ 0.2
CSF1P09603 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CSF1P09603 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSF1P09603 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.31■□□□□ 0.2
CSF1P09603 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.31■□□□□ 0.2
CSF1P09603 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CSF1P09603 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CSF1P09603 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSF1P09603 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSF1P09603 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSF1P09603 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSF1P09603 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSF1P09603 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSF1P09603 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSF1P09603 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSF1P09603 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSF1P09603 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSF1P09603 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.3■□□□□ 0.2
CSF1P09603 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.3■□□□□ 0.2
CSF1P09603 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CSF1P09603 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSF1P09603 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSF1P09603 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CSF1P09603 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSF1P09603 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSF1P09603 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CSF1P09603 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSF1P09603 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CSF1P09603 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CSF1P09603 DUSP5P2-201ENST00000426873 1033 ntBASIC16.3■□□□□ 0.2
CSF1P09603 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.3■□□□□ 0.2
CSF1P09603 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.3■□□□□ 0.2
CSF1P09603 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSF1P09603 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.3■□□□□ 0.2
CSF1P09603 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSF1P09603 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSF1P09603 AC100791.3-201ENST00000617619 330 ntBASIC16.3■□□□□ 0.2
CSF1P09603 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.3■□□□□ 0.2
CSF1P09603 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSF1P09603 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSF1P09603 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSF1P09603 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSF1P09603 AC067852.2-201ENST00000590513 2313 ntBASIC16.3■□□□□ 0.2
CSF1P09603 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSF1P09603 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSF1P09603 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.3■□□□□ 0.2
CSF1P09603 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSF1P09603 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSF1P09603 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSF1P09603 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSF1P09603 AL162741.1-201ENST00000565563 1558 ntBASIC16.3■□□□□ 0.2
CSF1P09603 AC116351.2-201ENST00000606540 1585 ntBASIC16.3■□□□□ 0.2
CSF1P09603 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.29■□□□□ 0.2
CSF1P09603 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSF1P09603 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSF1P09603 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CSF1P09603 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSF1P09603 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CSF1P09603 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CSF1P09603 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CSF1P09603 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.29■□□□□ 0.2
CSF1P09603 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.29■□□□□ 0.2
CSF1P09603 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSF1P09603 RPS2P52-201ENST00000469610 820 ntBASIC16.29■□□□□ 0.2
CSF1P09603 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.29■□□□□ 0.2
CSF1P09603 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.29■□□□□ 0.2
CSF1P09603 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSF1P09603 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CSF1P09603 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSF1P09603 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSF1P09603 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSF1P09603 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSF1P09603 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSF1P09603 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CSF1P09603 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSF1P09603 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.29■□□□□ 0.2
CSF1P09603 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.29■□□□□ 0.2
CSF1P09603 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSF1P09603 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSF1P09603 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CSF1P09603 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSF1P09603 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CSF1P09603 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSF1P09603 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CSF1P09603 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSF1P09603 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.28■□□□□ 0.2
CSF1P09603 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.28■□□□□ 0.2
CSF1P09603 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.28■□□□□ 0.2
CSF1P09603 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSF1P09603 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSF1P09603 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSF1P09603 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSF1P09603 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.28■□□□□ 0.2
CSF1P09603 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSF1P09603 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms