Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 AL138781.2-201ENST00000617896 1843 ntBASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 CROCCP1-201ENST00000426910 5675 ntBASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 ESRRAP1-201ENST00000400596 1257 ntBASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRAV12-3A0A0B4J271 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRAV12-3A0A0B4J271 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms