Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HS3ST3A1Q9Y663 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.52■□□□□ 0.56
HS3ST3A1Q9Y663 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.52■□□□□ 0.56
HS3ST3A1Q9Y663 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HS3ST3A1Q9Y663 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.52■□□□□ 0.56
HS3ST3A1Q9Y663 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HS3ST3A1Q9Y663 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.52■□□□□ 0.56
HS3ST3A1Q9Y663 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HS3ST3A1Q9Y663 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.52■□□□□ 0.56
HS3ST3A1Q9Y663 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.52■□□□□ 0.56
HS3ST3A1Q9Y663 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.52■□□□□ 0.56
HS3ST3A1Q9Y663 MIR3917-201ENST00000580971 93 ntBASIC18.52■□□□□ 0.56
HS3ST3A1Q9Y663 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.52■□□□□ 0.56
HS3ST3A1Q9Y663 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
HS3ST3A1Q9Y663 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.52■□□□□ 0.56
HS3ST3A1Q9Y663 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.55
HS3ST3A1Q9Y663 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HS3ST3A1Q9Y663 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HS3ST3A1Q9Y663 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HS3ST3A1Q9Y663 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HS3ST3A1Q9Y663 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 KRT18P23-201ENST00000435622 1283 ntBASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 AC104390.1-201ENST00000555663 520 ntBASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.51■□□□□ 0.55
HS3ST3A1Q9Y663 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 AL645929.1-201ENST00000420084 975 ntBASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HS3ST3A1Q9Y663 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HS3ST3A1Q9Y663 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HS3ST3A1Q9Y663 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HS3ST3A1Q9Y663 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HS3ST3A1Q9Y663 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HS3ST3A1Q9Y663 PCDHAC2-203ENST00000615316 3011 ntBASIC18.49■□□□□ 0.55
HS3ST3A1Q9Y663 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
HS3ST3A1Q9Y663 HLA-F-220ENST00000434407 884 ntBASIC18.49■□□□□ 0.55
HS3ST3A1Q9Y663 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
HS3ST3A1Q9Y663 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HS3ST3A1Q9Y663 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
HS3ST3A1Q9Y663 AL157888.1-201ENST00000631930 593 ntBASIC18.49■□□□□ 0.55
HS3ST3A1Q9Y663 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HS3ST3A1Q9Y663 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.49■□□□□ 0.55
HS3ST3A1Q9Y663 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HS3ST3A1Q9Y663 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HS3ST3A1Q9Y663 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HS3ST3A1Q9Y663 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HS3ST3A1Q9Y663 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HS3ST3A1Q9Y663 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HS3ST3A1Q9Y663 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.48■□□□□ 0.55
HS3ST3A1Q9Y663 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HS3ST3A1Q9Y663 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.48■□□□□ 0.55
HS3ST3A1Q9Y663 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.48■□□□□ 0.55
HS3ST3A1Q9Y663 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HS3ST3A1Q9Y663 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HS3ST3A1Q9Y663 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HS3ST3A1Q9Y663 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HS3ST3A1Q9Y663 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HS3ST3A1Q9Y663 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.48■□□□□ 0.55
HS3ST3A1Q9Y663 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms