Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 Z85996.1-201ENST00000494644 937 ntBASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 C1QBPP2-201ENST00000528754 825 ntBASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 AL031598.1-201ENST00000561511 1773 ntBASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF11Q9Y3C5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF11Q9Y3C5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 AL445675.2-201ENST00000620291 557 ntBASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 AL512353.2-201ENST00000448759 1962 ntBASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF11Q9Y3C5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF11Q9Y3C5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF11Q9Y3C5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms