Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 AL023973.1-201ENST00000624619 620 ntBASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 AL031432.5-201ENST00000641059 760 ntBASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNEP1R1Q8N9A8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 TSPY5P-201ENST00000426936 936 ntBASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 AC063952.2-201ENST00000498792 1227 ntBASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 AC011558.1-201ENST00000623459 338 ntBASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNEP1R1Q8N9A8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 AC073130.3-201ENST00000624389 2278 ntBASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 AP000523.1-201ENST00000398242 1049 ntBASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 AC009947.2-201ENST00000444014 672 ntBASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNEP1R1Q8N9A8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNEP1R1Q8N9A8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CNEP1R1Q8N9A8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CNEP1R1Q8N9A8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CNEP1R1Q8N9A8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNEP1R1Q8N9A8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CNEP1R1Q8N9A8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.77■□□□□ 0.27
CNEP1R1Q8N9A8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.76■□□□□ 0.27
CNEP1R1Q8N9A8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms