Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DHX40Q8IX18 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
DHX40Q8IX18 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DHX40Q8IX18 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21■□□□□ 0.95
DHX40Q8IX18 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21■□□□□ 0.95
DHX40Q8IX18 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21■□□□□ 0.95
DHX40Q8IX18 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21■□□□□ 0.95
DHX40Q8IX18 AC060766.5-201ENST00000590539 871 ntBASIC21■□□□□ 0.95
DHX40Q8IX18 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21■□□□□ 0.95
DHX40Q8IX18 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21■□□□□ 0.95
DHX40Q8IX18 HLA-A-209ENST00000638375 975 ntBASIC21■□□□□ 0.95
DHX40Q8IX18 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DHX40Q8IX18 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DHX40Q8IX18 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21■□□□□ 0.95
DHX40Q8IX18 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
DHX40Q8IX18 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
DHX40Q8IX18 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DHX40Q8IX18 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DHX40Q8IX18 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21■□□□□ 0.95
DHX40Q8IX18 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DHX40Q8IX18 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DHX40Q8IX18 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.99■□□□□ 0.95
DHX40Q8IX18 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DHX40Q8IX18 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.99■□□□□ 0.95
DHX40Q8IX18 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DHX40Q8IX18 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DHX40Q8IX18 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.99■□□□□ 0.95
DHX40Q8IX18 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DHX40Q8IX18 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.99■□□□□ 0.95
DHX40Q8IX18 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
DHX40Q8IX18 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DHX40Q8IX18 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DHX40Q8IX18 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.99■□□□□ 0.95
DHX40Q8IX18 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DHX40Q8IX18 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.99■□□□□ 0.95
DHX40Q8IX18 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DHX40Q8IX18 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DHX40Q8IX18 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.99■□□□□ 0.95
DHX40Q8IX18 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
DHX40Q8IX18 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.99■□□□□ 0.95
DHX40Q8IX18 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DHX40Q8IX18 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.99■□□□□ 0.95
DHX40Q8IX18 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.99■□□□□ 0.95
DHX40Q8IX18 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.98■□□□□ 0.95
DHX40Q8IX18 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.98■□□□□ 0.95
DHX40Q8IX18 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
DHX40Q8IX18 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.98■□□□□ 0.95
DHX40Q8IX18 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DHX40Q8IX18 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DHX40Q8IX18 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DHX40Q8IX18 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DHX40Q8IX18 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.98■□□□□ 0.95
DHX40Q8IX18 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DHX40Q8IX18 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DHX40Q8IX18 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DHX40Q8IX18 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DHX40Q8IX18 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.98■□□□□ 0.95
DHX40Q8IX18 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.98■□□□□ 0.95
DHX40Q8IX18 AL160286.2-201ENST00000567150 934 ntBASIC20.98■□□□□ 0.95
DHX40Q8IX18 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DHX40Q8IX18 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.98■□□□□ 0.95
DHX40Q8IX18 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
DHX40Q8IX18 TMEM191A-211ENST00000637163 1067 ntBASIC20.98■□□□□ 0.95
DHX40Q8IX18 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.98■□□□□ 0.95
DHX40Q8IX18 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
DHX40Q8IX18 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DHX40Q8IX18 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.98■□□□□ 0.95
DHX40Q8IX18 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.98■□□□□ 0.95
DHX40Q8IX18 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DHX40Q8IX18 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
DHX40Q8IX18 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DHX40Q8IX18 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
DHX40Q8IX18 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
DHX40Q8IX18 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DHX40Q8IX18 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.98■□□□□ 0.95
DHX40Q8IX18 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.98■□□□□ 0.95
DHX40Q8IX18 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DHX40Q8IX18 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
DHX40Q8IX18 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DHX40Q8IX18 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DHX40Q8IX18 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DHX40Q8IX18 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DHX40Q8IX18 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
DHX40Q8IX18 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DHX40Q8IX18 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.97■□□□□ 0.95
DHX40Q8IX18 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
DHX40Q8IX18 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
DHX40Q8IX18 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.97■□□□□ 0.95
DHX40Q8IX18 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DHX40Q8IX18 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.97■□□□□ 0.95
DHX40Q8IX18 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DHX40Q8IX18 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DHX40Q8IX18 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DHX40Q8IX18 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.97■□□□□ 0.95
DHX40Q8IX18 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.97■□□□□ 0.95
DHX40Q8IX18 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.97■□□□□ 0.95
DHX40Q8IX18 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.97■□□□□ 0.95
DHX40Q8IX18 AC097658.1-201ENST00000475555 843 ntBASIC20.97■□□□□ 0.95
DHX40Q8IX18 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.97■□□□□ 0.95
DHX40Q8IX18 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms