Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRTM1Q86UE6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 MIPEPP3-201ENST00000412105 444 ntBASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 AC026271.2-201ENST00000428091 497 ntBASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 TSPY23P-201ENST00000440136 739 ntBASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 HCG11-201ENST00000411553 5696 ntBASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LRRTM1Q86UE6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRTM1Q86UE6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 AC091874.3-201ENST00000512672 1195 ntBASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 AL121829.2-201ENST00000620908 328 ntBASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 AC073111.5-205ENST00000641717 521 ntBASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRTM1Q86UE6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms