Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 HACD1-201ENST00000326961 773 ntTSL 2 BASIC14.46□□□□□ -0.09
LINC00479Q96M42 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.46□□□□□ -0.09
LINC00479Q96M42 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.46□□□□□ -0.09
LINC00479Q96M42 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
LINC00479Q96M42 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.46□□□□□ -0.09
LINC00479Q96M42 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LINC00479Q96M42 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LINC00479Q96M42 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
LINC00479Q96M42 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
LINC00479Q96M42 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LINC00479Q96M42 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.46□□□□□ -0.09
LINC00479Q96M42 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.46□□□□□ -0.09
LINC00479Q96M42 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00479Q96M42 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00479Q96M42 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00479Q96M42 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00479Q96M42 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00479Q96M42 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.46□□□□□ -0.1
LINC00479Q96M42 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
LINC00479Q96M42 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC00479Q96M42 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LINC00479Q96M42 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 AC008764.6-201ENST00000595909 2069 ntBASIC14.45□□□□□ -0.1
LINC00479Q96M42 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
LINC00479Q96M42 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LINC00479Q96M42 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.45□□□□□ -0.1
LINC00479Q96M42 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LINC00479Q96M42 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LINC00479Q96M42 AC137761.2-201ENST00000561729 223 ntBASIC14.45□□□□□ -0.1
LINC00479Q96M42 AC145350.3-201ENST00000569033 163 ntBASIC14.45□□□□□ -0.1
LINC00479Q96M42 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC00479Q96M42 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 BID-214ENST00000617586 542 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC00479Q96M42 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
LINC00479Q96M42 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 AC073592.3-201ENST00000625118 1834 ntBASIC14.45□□□□□ -0.1
LINC00479Q96M42 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.45□□□□□ -0.1
LINC00479Q96M42 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC00479Q96M42 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LINC00479Q96M42 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00479Q96M42 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00479Q96M42 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LINC00479Q96M42 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00479Q96M42 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 GPX1P1-201ENST00000388829 606 ntBASIC14.44□□□□□ -0.1
LINC00479Q96M42 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.44□□□□□ -0.1
LINC00479Q96M42 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.44□□□□□ -0.1
LINC00479Q96M42 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 BCL2-203ENST00000589955 5011 ntBASIC14.44□□□□□ -0.1
LINC00479Q96M42 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00479Q96M42 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00479Q96M42 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms