Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 RPL12-204ENST00000497825 864 ntTSL 216.02■□□□□ 0.163e-6■■□□□ 13
LARP4Q71RC2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.93■□□□□ 0.143e-6■■□□□ 13
LARP4Q71RC2 DOT1L-204ENST00000457590 2907 ntTSL 515.9■□□□□ 0.143e-6■■□□□ 13
LARP4Q71RC2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.76■□□□□ 0.112e-11■■□□□ 13
LARP4Q71RC2 ANKMY1-212ENST00000411765 652 ntTSL 415.37■□□□□ 0.053e-6■■□□□ 13
LARP4Q71RC2 DTYMK-207ENST00000493095 322 ntTSL 515.19■□□□□ 0.023e-6■■□□□ 13
LARP4Q71RC2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.023e-6■■□□□ 13
LARP4Q71RC2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.053e-6■■□□□ 13
LARP4Q71RC2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.71□□□□□ -0.062e-11■■□□□ 13
LARP4Q71RC2 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.44□□□□□ -0.13e-6■■□□□ 13
LARP4Q71RC2 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.113e-6■■□□□ 13
LARP4Q71RC2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.183e-6■■□□□ 13
LARP4Q71RC2 TRAF4-210ENST00000475329 544 ntTSL 313.34□□□□□ -0.273e-6■■□□□ 13
LARP4Q71RC2 TRAF4-212ENST00000498540 748 ntTSL 313.23□□□□□ -0.293e-6■■□□□ 13
LARP4Q71RC2 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.333e-6■■□□□ 13
LARP4Q71RC2 MARK4-203ENST00000587566 553 ntTSL 512.82□□□□□ -0.363e-6■■□□□ 13
LARP4Q71RC2 DHX9-202ENST00000473076 1378 ntTSL 1 (best)12.81□□□□□ -0.363e-6■■□□□ 13
LARP4Q71RC2 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC12.46□□□□□ -0.413e-6■■□□□ 13
LARP4Q71RC2 AAMP-205ENST00000447885 671 ntTSL 512.17□□□□□ -0.463e-6■■□□□ 13
LARP4Q71RC2 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC12.13□□□□□ -0.473e-6■■□□□ 13
LARP4Q71RC2 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.473e-6■■□□□ 13
LARP4Q71RC2 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.483e-6■■□□□ 13
LARP4Q71RC2 RBM14-205ENST00000443702 732 ntTSL 3 BASIC12.03□□□□□ -0.483e-6■■□□□ 13
LARP4Q71RC2 CDK2AP1-204ENST00000538446 1161 ntTSL 5 BASIC11.99□□□□□ -0.492e-11■■□□□ 13
LARP4Q71RC2 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.53e-6■■□□□ 13
LARP4Q71RC2 FPGS-211ENST00000475270 560 ntTSL 211.7□□□□□ -0.543e-6■■□□□ 13
LARP4Q71RC2 WARS-202ENST00000355338 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.573e-6■■□□□ 13
LARP4Q71RC2 DHX9-207ENST00000485081 2531 ntTSL 211.42□□□□□ -0.583e-6■■□□□ 13
LARP4Q71RC2 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC11.16□□□□□ -0.623e-6■■□□□ 13
LARP4Q71RC2 RBM14-203ENST00000409372 876 ntTSL 2 BASIC11.14□□□□□ -0.633e-6■■□□□ 13
LARP4Q71RC2 VPS72-205ENST00000491094 4267 ntTSL 511.13□□□□□ -0.633e-6■■□□□ 13
LARP4Q71RC2 PEF1-202ENST00000461006 732 ntTSL 511.01□□□□□ -0.653e-6■■□□□ 13
LARP4Q71RC2 AAMP-206ENST00000461911 567 ntTSL 210.78□□□□□ -0.683e-6■■□□□ 13
LARP4Q71RC2 RPL12-205ENST00000536368 499 ntTSL 1 (best) BASIC10.2□□□□□ -0.783e-6■■□□□ 13
LARP4Q71RC2 DROSHA-207ENST00000507438 860 ntTSL 410.15□□□□□ -0.783e-6■■□□□ 13
LARP4Q71RC2 DROSHA-202ENST00000442743 4991 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.833e-6■■□□□ 13
LARP4Q71RC2 WARS-201ENST00000344102 2690 ntTSL 5 BASIC9.84□□□□□ -0.833e-6■■□□□ 13
LARP4Q71RC2 WARS-238ENST00000557135 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.853e-6■■□□□ 13
LARP4Q71RC2 CCDC58-205ENST00000479899 545 ntTSL 3 BASIC9.67□□□□□ -0.861e-14■■□□□ 13
LARP4Q71RC2 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC9.51□□□□□ -0.893e-6■■□□□ 13
LARP4Q71RC2 PEF1-205ENST00000478502 750 ntTSL 29.47□□□□□ -0.893e-6■■□□□ 13
LARP4Q71RC2 AL450998.1-201ENST00000321418 438 ntBASIC9.3□□□□□ -0.923e-6■■□□□ 13
LARP4Q71RC2 DTYMK-206ENST00000464603 890 ntTSL 28.96□□□□□ -0.983e-6■■□□□ 13
LARP4Q71RC2 CCDC58-201ENST00000291458 720 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.981e-14■■□□□ 13
LARP4Q71RC2 CCDC58-206ENST00000497726 438 ntTSL 5 BASIC8.94□□□□□ -0.981e-14■■□□□ 13
LARP4Q71RC2 AC068768.1-202ENST00000541002 1110 ntTSL 5 BASIC8.93□□□□□ -0.982e-11■■□□□ 13
LARP4Q71RC2 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.993e-6■■□□□ 13
LARP4Q71RC2 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.013e-6■■□□□ 13
LARP4Q71RC2 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.033e-6■■□□□ 13
LARP4Q71RC2 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC7.65□□□□□ -1.182e-11■■□□□ 13
LARP4Q71RC2 RPL12-201ENST00000361436 633 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.263e-6■■□□□ 13
LARP4Q71RC2 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.563e-6■■□□□ 13
LARP4Q71RC2 CCDC58-203ENST00000466854 769 ntTSL 35.25□□□□□ -1.571e-14■■□□□ 13
LARP4Q71RC2 CCDC58-202ENST00000460810 573 ntTSL 25.1□□□□□ -1.591e-14■■□□□ 13
LARP4Q71RC2 MBNL3-208ENST00000436215 891 ntTSL 34.93□□□□□ -1.623e-6■■□□□ 13
LARP4Q71RC2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.961e-10■■□□□ 13
LARP4Q71RC2 ATP6AP1-209ENST00000491569 2079 ntTSL 220■□□□□ 0.791e-10■■□□□ 13
LARP4Q71RC2 ATP6AP1-207ENST00000455205 4515 ntTSL 214.74□□□□□ -0.051e-10■■□□□ 13
LARP4Q71RC2 ATP6AP1-210ENST00000619046 2823 ntTSL 1 (best) BASIC12.59□□□□□ -0.391e-10■■□□□ 13
LARP4Q71RC2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.415e-8■■□□□ 13
LARP4Q71RC2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.49■□□□□ 0.395e-8■■□□□ 13
LARP4Q71RC2 RPS28-201ENST00000417088 334 ntTSL 213.42□□□□□ -0.266e-9■■□□□ 13
LARP4Q71RC2 TMEM141-203ENST00000479737 491 ntTSL 215.75■□□□□ 0.117e-8■■□□□ 13
LARP4Q71RC2 TMEM141-206ENST00000489739 551 ntTSL 311.36□□□□□ -0.597e-8■■□□□ 13
LARP4Q71RC2 RPS3-206ENST00000526248 771 ntTSL 514.47□□□□□ -0.098e-16■■□□□ 13
LARP4Q71RC2 CNPY2-206ENST00000548013 817 ntTSL 1 (best)16.31■□□□□ 0.24e-12■■□□□ 13
LARP4Q71RC2 CNPY2-202ENST00000546388 670 ntTSL 1 (best)15.82■□□□□ 0.124e-12■■□□□ 13
LARP4Q71RC2 CNPY2-211ENST00000553164 666 ntTSL 515.14■□□□□ 0.014e-12■■□□□ 13
LARP4Q71RC2 ERGIC3-205ENST00000413587 977 ntTSL 511.85□□□□□ -0.512e-7■■□□□ 13
LARP4Q71RC2 GALM-205ENST00000444351 834 ntTSL 513.69□□□□□ -0.222e-7■■□□□ 13
LARP4Q71RC2 GALM-202ENST00000410063 1023 ntTSL 3 BASIC11.79□□□□□ -0.522e-7■■□□□ 13
LARP4Q71RC2 GALM-201ENST00000272252 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.72e-7■■□□□ 13
LARP4Q71RC2 GALM-204ENST00000434934 724 ntTSL 33.7□□□□□ -1.822e-7■■□□□ 13
LARP4Q71RC2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.47■□□□□ 0.072e-20■■□□□ 13
LARP4Q71RC2 FABP1-204ENST00000495375 2084 ntTSL 314.71□□□□□ -0.052e-20■■□□□ 13
LARP4Q71RC2 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.162e-20■■□□□ 13
LARP4Q71RC2 TTR-202ENST00000432547 745 ntTSL 26.51□□□□□ -1.373e-10■■□□□ 13
LARP4Q71RC2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.31■□□□□ 0.842e-7■■□□□ 13
LARP4Q71RC2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.26■□□□□ 0.832e-7■■□□□ 13
LARP4Q71RC2 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC12.39□□□□□ -0.432e-7■■□□□ 13
LARP4Q71RC2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.5■■□□□ 1.192e-11■■□□□ 12.9
LARP4Q71RC2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.712e-11■■□□□ 12.9
LARP4Q71RC2 ARL6IP4-202ENST00000357866 546 ntTSL 1 (best) BASIC9.97□□□□□ -0.812e-11■■□□□ 12.9
LARP4Q71RC2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.28e-10■■□□□ 12.9
LARP4Q71RC2 GGH-203ENST00000518466 696 ntTSL 36.78□□□□□ -1.328e-10■■□□□ 12.9
LARP4Q71RC2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.94■□□□□ 0.142e-8■■□□□ 12.9
LARP4Q71RC2 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.222e-8■■□□□ 12.9
LARP4Q71RC2 RPS3-215ENST00000530170 531 ntTSL 59.15□□□□□ -0.948e-17■■□□□ 12.9
LARP4Q71RC2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.895e-7■■□□□ 12.9
LARP4Q71RC2 CFL1-209ENST00000530413 647 ntTSL 1 (best)13.71□□□□□ -0.212e-9■■□□□ 12.9
LARP4Q71RC2 CFL1-213ENST00000532134 855 ntTSL 511.78□□□□□ -0.522e-9■■□□□ 12.9
LARP4Q71RC2 CAPNS1-212ENST00000591041 812 ntTSL 322■■□□□ 1.112e-6■■□□□ 12.9
LARP4Q71RC2 CDC37-205ENST00000589625 587 ntTSL 214.74□□□□□ -0.051e-16■■□□□ 12.9
LARP4Q71RC2 COMT-210ENST00000467943 546 ntTSL 222.21■■□□□ 1.157e-7■■□□□ 12.9
LARP4Q71RC2 BAX-208ENST00000503726 488 ntTSL 214.6□□□□□ -0.071e-7■■□□□ 12.9
LARP4Q71RC2 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.06■□□□□ 03e-8■■□□□ 12.9
LARP4Q71RC2 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.06■□□□□ 03e-8■■□□□ 12.9
LARP4Q71RC2 SLC38A5-211ENST00000615300 797 ntTSL 313.99□□□□□ -0.173e-8■■□□□ 12.9
LARP4Q71RC2 SLC38A5-209ENST00000497336 493 ntTSL 513.6□□□□□ -0.233e-8■■□□□ 12.9
LARP4Q71RC2 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.233e-8■■□□□ 12.9
Retrieved 100 of 15,922 protein–RNA pairs in 301.9 ms