RNA–Protein interactions for RNA: ENST00000432547.7

TTR-202, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 745 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-202ENST00000432547 AEBP2Q6ZN18 517 aaPredicted RBP32.33■■■□□ 2.77
TTR-202ENST00000432547 CHIC1Q5VXU3 224 aa30.54■■■□□ 2.48
TTR-202ENST00000432547 SENP3Q9H4L4 574 aaPredicted RBP27.41■■□□□ 1.98
TTR-202ENST00000432547 PHF23Q9BUL5 403 aaPredicted RBP27.12■■□□□ 1.93
TTR-202ENST00000432547 FOXD1Q16676 465 aa25.67■■□□□ 1.7
TTR-202ENST00000432547 PLPPR3Q6T4P5 718 aa24.3■■□□□ 1.48
TTR-202ENST00000432547 PPP6R1Q9UPN7 881 aa24.02■■□□□ 1.44
TTR-202ENST00000432547 MSH5O43196 834 aa23.91■■□□□ 1.42
TTR-202ENST00000432547 ADRA2BP18089 450 aa23.89■■□□□ 1.41
TTR-202ENST00000432547 PIAS4Q8N2W9 510 aaPredicted RBP23.89■■□□□ 1.41
TTR-202ENST00000432547 POTEDQ86YR6 584 aa23.57■■□□□ 1.36
TTR-202ENST00000432547 MAPK8IP2Q13387 824 aaPredicted RBP21.99■■□□□ 1.11
TTR-202ENST00000432547 DMRT2Q9Y5R5 561 aa21.79■■□□□ 1.08
TTR-202ENST00000432547 SCAF1Q9H7N4 1312 aaKnown RBP21.66■■□□□ 1.06
TTR-202ENST00000432547 PPP4R3CPQ6ZMV5 832 aa21.34■■□□□ 1.01
TTR-202ENST00000432547 HOXD11P31277 338 aaPredicted RBP20.97■□□□□ 0.95
TTR-202ENST00000432547 CNKSR2Q8WXI2 1034 aa20.91■□□□□ 0.94
TTR-202ENST00000432547 DCAF8L1A6NGE4 600 aa20.8■□□□□ 0.92
TTR-202ENST00000432547 RNF216Q9NWF9 866 aaPredicted RBP20.76■□□□□ 0.91
TTR-202ENST00000432547 CACNB1Q02641 598 aaPredicted RBP20.57■□□□□ 0.88
TTR-202ENST00000432547 RNF39Q9H2S5 420 aa20.49■□□□□ 0.87
TTR-202ENST00000432547 NCBP3Q53F19 620 aaKnown RBP20.38■□□□□ 0.85
TTR-202ENST00000432547 NPM3O75607 178 aaKnown RBP20.24■□□□□ 0.83
TTR-202ENST00000432547 DNAJC5BQ9UF47 199 aa20.21■□□□□ 0.83
TTR-202ENST00000432547 C1QBPQ07021 282 aaKnown RBP20.12■□□□□ 0.81
TTR-202ENST00000432547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.89■□□□□ 0.77
TTR-202ENST00000432547 KCNA4P22459 653 aa19.81■□□□□ 0.76
TTR-202ENST00000432547 U3KPZ7 1027 aaPredicted RBP19.58■□□□□ 0.72
TTR-202ENST00000432547 SLC4A2P04920 1241 aa19.4■□□□□ 0.7
TTR-202ENST00000432547 SPINK5Q9NQ38 1064 aaPredicted RBP19.33■□□□□ 0.68
TTR-202ENST00000432547 CAPN15O75808 1086 aa19.18■□□□□ 0.66
TTR-202ENST00000432547 DSG3P32926 999 aa19.18■□□□□ 0.66
TTR-202ENST00000432547 TRHP20396 242 aaPredicted RBP18.88■□□□□ 0.61
TTR-202ENST00000432547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.81■□□□□ 0.6
TTR-202ENST00000432547 HNRNPUL2Q1KMD3 747 aaKnown RBP18.81■□□□□ 0.6
TTR-202ENST00000432547 ABCB7O75027 752 aa18.8■□□□□ 0.6
TTR-202ENST00000432547 APLP2Q06481 763 aa18.79■□□□□ 0.6
TTR-202ENST00000432547 ZNF219Q9P2Y4 722 aaPredicted RBP18.79■□□□□ 0.6
TTR-202ENST00000432547 SAMD1Q6SPF0 538 aaPredicted RBP18.75■□□□□ 0.59
TTR-202ENST00000432547 MYCNP04198 464 aaPredicted RBP18.64■□□□□ 0.57
TTR-202ENST00000432547 SLC4A1APQ9BWU0 796 aaKnown RBP18.61■□□□□ 0.57
TTR-202ENST00000432547 FOXD4L1Q9NU39 408 aa18.43■□□□□ 0.54
TTR-202ENST00000432547 POTEHQ6S545 545 aa18.41■□□□□ 0.54
TTR-202ENST00000432547 POLA2Q14181 598 aa18.38■□□□□ 0.53
TTR-202ENST00000432547 ATF5Q9Y2D1 282 aaPredicted RBP18.36■□□□□ 0.53
TTR-202ENST00000432547 ZBTB22O15209 634 aa18.29■□□□□ 0.52
TTR-202ENST00000432547 RBM42Q9BTD8 480 aaKnown RBP18.16■□□□□ 0.5
TTR-202ENST00000432547 ZBTB12Q9Y330 459 aaPredicted RBP17.89■□□□□ 0.45
TTR-202ENST00000432547 CHRDL2Q6WN34 429 aa17.87■□□□□ 0.45
TTR-202ENST00000432547 ATXN8OSP0DMR3 200 aa17.84■□□□□ 0.45
TTR-202ENST00000432547 OSCARQ8IYS5 282 aa17.83■□□□□ 0.44
TTR-202ENST00000432547 AKT1S1Q96B36 256 aa17.79■□□□□ 0.44
TTR-202ENST00000432547 REM2Q8IYK8 340 aaPredicted RBP17.67■□□□□ 0.42
TTR-202ENST00000432547 MKRN4PQ13434 485 aaPredicted RBP17.51■□□□□ 0.39
TTR-202ENST00000432547 PITPNM1O00562 1244 aa17.5■□□□□ 0.39
TTR-202ENST00000432547 PIP4P2Q8N4L2 257 aa17.48■□□□□ 0.39
TTR-202ENST00000432547 FBLN2P98095 1184 aa17.43■□□□□ 0.38
TTR-202ENST00000432547 SPDYE2BA6NHP3 402 aa17.4■□□□□ 0.38
TTR-202ENST00000432547 SPDYE6P0CI01 402 aa17.4■□□□□ 0.38
TTR-202ENST00000432547 SPDYE2Q495Y8 402 aa17.4■□□□□ 0.38
TTR-202ENST00000432547 FXR2P51116 673 aaKnown RBP eCLIP17.36■□□□□ 0.37
TTR-202ENST00000432547 CSRNP3Q8WYN3 585 aa17.33■□□□□ 0.36
TTR-202ENST00000432547 SSUH2Q9Y2M2 353 aa17.24■□□□□ 0.35
TTR-202ENST00000432547 SP7Q8TDD2 431 aaPredicted RBP17.23■□□□□ 0.35
TTR-202ENST00000432547 ZNF692Q9BU19 519 aaPredicted RBP17.18■□□□□ 0.34
TTR-202ENST00000432547 HAX1O00165 279 aa17.1■□□□□ 0.33
TTR-202ENST00000432547 SPDYE1Q8NFV5 336 aaPredicted RBP17.09■□□□□ 0.33
TTR-202ENST00000432547 CLEC11AQ9Y240 323 aa17.07■□□□□ 0.32
TTR-202ENST00000432547 EVX2Q03828 476 aa17.05■□□□□ 0.32
TTR-202ENST00000432547 PRKAR2AP13861 404 aaKnown RBP17■□□□□ 0.31
TTR-202ENST00000432547 EHMT2Q96KQ7 1210 aa17■□□□□ 0.31
TTR-202ENST00000432547 PABPN1Q86U42 306 aaKnown RBP eCLIP16.96■□□□□ 0.31
TTR-202ENST00000432547 CHADLQ6NUI6 762 aa16.85■□□□□ 0.29
TTR-202ENST00000432547 C19orf67A6NJJ6 358 aa16.81■□□□□ 0.28
TTR-202ENST00000432547 PRR29P0C7W0 189 aa16.78■□□□□ 0.28
TTR-202ENST00000432547 GABBR2O75899 941 aa16.57■□□□□ 0.24
TTR-202ENST00000432547 FARP1Q9Y4F1 1045 aaPredicted RBP16.56■□□□□ 0.24
TTR-202ENST00000432547 SPDYE4A6NLX3 237 aa16.52■□□□□ 0.24
TTR-202ENST00000432547 CD44P16070 742 aaKnown RBP16.45■□□□□ 0.22
TTR-202ENST00000432547 CREBZFQ9NS37 354 aa16.45■□□□□ 0.22
TTR-202ENST00000432547 STAG3Q9UJ98 1225 aa16.39■□□□□ 0.21
TTR-202ENST00000432547 POTEIP0CG38 1075 aa16.3■□□□□ 0.2
TTR-202ENST00000432547 ZNF579Q8NAF0 562 aaKnown RBP16.22■□□□□ 0.19
TTR-202ENST00000432547 MNX1P50219 401 aaPredicted RBP16.21■□□□□ 0.19
TTR-202ENST00000432547 PROM2Q8N271 834 aa16.21■□□□□ 0.19
TTR-202ENST00000432547 ZRANB1Q9UGI0 708 aa16.2■□□□□ 0.18
TTR-202ENST00000432547 LHX8Q68G74 356 aa16.15■□□□□ 0.18
TTR-202ENST00000432547 CLCN6P51797 869 aa16.14■□□□□ 0.17
TTR-202ENST00000432547 GALR2O43603 387 aaPredicted RBP16.06■□□□□ 0.16
TTR-202ENST00000432547 PHF12Q96QT6 1004 aa16.04■□□□□ 0.16
TTR-202ENST00000432547 NPM1P06748 294 aaKnown RBP eCLIP16■□□□□ 0.15
TTR-202ENST00000432547 DCBLD2Q96PD2 775 aa16■□□□□ 0.15
TTR-202ENST00000432547 NISCHQ9Y2I1 1504 aa15.97■□□□□ 0.15
TTR-202ENST00000432547 PAK3O75914 559 aaPredicted RBP15.94■□□□□ 0.14
TTR-202ENST00000432547 PELP1Q8IZL8 1130 aaKnown RBP15.81■□□□□ 0.12
TTR-202ENST00000432547 MS4A3Q96HJ5 214 aa15.81■□□□□ 0.12
TTR-202ENST00000432547 TSPYL2Q9H2G4 693 aaPredicted RBP15.79■□□□□ 0.12
TTR-202ENST00000432547 CCDC61Q9Y6R9 512 aa15.78■□□□□ 0.12
TTR-202ENST00000432547 POTEB2H3BUK9 544 aa15.77■□□□□ 0.12
TTR-202ENST00000432547 MIER1Q8N108 512 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms