RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 AEBP2Q6ZN18 517 aaPredicted RBP25.01■■□□□ 1.59
CCDC58-202ENST00000460810 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
CCDC58-202ENST00000460810 SENP3Q9H4L4 574 aaPredicted RBP21.41■■□□□ 1.02
CCDC58-202ENST00000460810 PHF23Q9BUL5 403 aaPredicted RBP21.1■□□□□ 0.97
CCDC58-202ENST00000460810 FOXD1Q16676 465 aa19.91■□□□□ 0.78
CCDC58-202ENST00000460810 PLPPR3Q6T4P5 718 aa19■□□□□ 0.63
CCDC58-202ENST00000460810 MSH5O43196 834 aa18.7■□□□□ 0.58
CCDC58-202ENST00000460810 PIAS4Q8N2W9 510 aaPredicted RBP18.6■□□□□ 0.57
CCDC58-202ENST00000460810 PPP6R1Q9UPN7 881 aa18.57■□□□□ 0.56
CCDC58-202ENST00000460810 ADRA2BP18089 450 aa18.51■□□□□ 0.55
CCDC58-202ENST00000460810 POTEDQ86YR6 584 aa18.25■□□□□ 0.51
CCDC58-202ENST00000460810 SCAF1Q9H7N4 1312 aaKnown RBP17.03■□□□□ 0.32
CCDC58-202ENST00000460810 MAPK8IP2Q13387 824 aaPredicted RBP17■□□□□ 0.31
CCDC58-202ENST00000460810 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
CCDC58-202ENST00000460810 PPP4R3CPQ6ZMV5 832 aa16.62■□□□□ 0.25
CCDC58-202ENST00000460810 CNKSR2Q8WXI2 1034 aa16.35■□□□□ 0.21
CCDC58-202ENST00000460810 HOXD11P31277 338 aaPredicted RBP16.34■□□□□ 0.21
CCDC58-202ENST00000460810 RNF216Q9NWF9 866 aaPredicted RBP16.21■□□□□ 0.19
CCDC58-202ENST00000460810 DCAF8L1A6NGE4 600 aa16.2■□□□□ 0.18
CCDC58-202ENST00000460810 CACNB1Q02641 598 aaPredicted RBP16.03■□□□□ 0.16
CCDC58-202ENST00000460810 NCBP3Q53F19 620 aaKnown RBP16.02■□□□□ 0.16
CCDC58-202ENST00000460810 RNF39Q9H2S5 420 aa15.93■□□□□ 0.14
CCDC58-202ENST00000460810 DNAJC5BQ9UF47 199 aa15.86■□□□□ 0.13
CCDC58-202ENST00000460810 C1QBPQ07021 282 aaKnown RBP15.74■□□□□ 0.11
CCDC58-202ENST00000460810 NPM3O75607 178 aaKnown RBP15.73■□□□□ 0.11
CCDC58-202ENST00000460810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.54■□□□□ 0.08
CCDC58-202ENST00000460810 KCNA4P22459 653 aa15.38■□□□□ 0.05
CCDC58-202ENST00000460810 U3KPZ7 1027 aaPredicted RBP15.19■□□□□ 0.02
CCDC58-202ENST00000460810 SLC4A2P04920 1241 aa15.02■□□□□ -0
CCDC58-202ENST00000460810 SPINK5Q9NQ38 1064 aaPredicted RBP14.96□□□□□ -0.01
CCDC58-202ENST00000460810 CAPN15O75808 1086 aa14.95□□□□□ -0.02
CCDC58-202ENST00000460810 DSG3P32926 999 aa14.9□□□□□ -0.02
CCDC58-202ENST00000460810 APLP2Q06481 763 aa14.85□□□□□ -0.03
CCDC58-202ENST00000460810 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.83□□□□□ -0.04
CCDC58-202ENST00000460810 HNRNPUL2Q1KMD3 747 aaKnown RBP14.83□□□□□ -0.04
CCDC58-202ENST00000460810 ZNF219Q9P2Y4 722 aaPredicted RBP14.73□□□□□ -0.05
CCDC58-202ENST00000460810 SAMD1Q6SPF0 538 aaPredicted RBP14.72□□□□□ -0.05
CCDC58-202ENST00000460810 TRHP20396 242 aaPredicted RBP14.7□□□□□ -0.06
CCDC58-202ENST00000460810 MYCNP04198 464 aaPredicted RBP14.59□□□□□ -0.07
CCDC58-202ENST00000460810 ABCB7O75027 752 aa14.57□□□□□ -0.08
CCDC58-202ENST00000460810 SLC4A1APQ9BWU0 796 aaKnown RBP14.53□□□□□ -0.08
CCDC58-202ENST00000460810 FOXD4L1Q9NU39 408 aa14.4□□□□□ -0.1
CCDC58-202ENST00000460810 POLA2Q14181 598 aa14.32□□□□□ -0.12
CCDC58-202ENST00000460810 POTEHQ6S545 545 aa14.31□□□□□ -0.12
CCDC58-202ENST00000460810 RBM42Q9BTD8 480 aaKnown RBP14.26□□□□□ -0.13
CCDC58-202ENST00000460810 ATF5Q9Y2D1 282 aaPredicted RBP14.18□□□□□ -0.14
CCDC58-202ENST00000460810 ZBTB22O15209 634 aa14.11□□□□□ -0.15
CCDC58-202ENST00000460810 ZBTB12Q9Y330 459 aaPredicted RBP14.09□□□□□ -0.15
CCDC58-202ENST00000460810 ATXN8OSP0DMR3 200 aa14.01□□□□□ -0.17
CCDC58-202ENST00000460810 CHRDL2Q6WN34 429 aa13.92□□□□□ -0.18
CCDC58-202ENST00000460810 AKT1S1Q96B36 256 aa13.92□□□□□ -0.18
CCDC58-202ENST00000460810 OSCARQ8IYS5 282 aa13.83□□□□□ -0.2
CCDC58-202ENST00000460810 REM2Q8IYK8 340 aaPredicted RBP13.76□□□□□ -0.21
CCDC58-202ENST00000460810 FBLN2P98095 1184 aa13.71□□□□□ -0.21
CCDC58-202ENST00000460810 SPDYE2BA6NHP3 402 aa13.63□□□□□ -0.23
CCDC58-202ENST00000460810 SPDYE6P0CI01 402 aa13.63□□□□□ -0.23
CCDC58-202ENST00000460810 SPDYE2Q495Y8 402 aa13.63□□□□□ -0.23
CCDC58-202ENST00000460810 PITPNM1O00562 1244 aa13.58□□□□□ -0.24
CCDC58-202ENST00000460810 PIP4P2Q8N4L2 257 aa13.57□□□□□ -0.24
CCDC58-202ENST00000460810 MKRN4PQ13434 485 aaPredicted RBP13.54□□□□□ -0.24
CCDC58-202ENST00000460810 FXR2P51116 673 aaKnown RBP eCLIP13.52□□□□□ -0.25
CCDC58-202ENST00000460810 CSRNP3Q8WYN3 585 aa13.47□□□□□ -0.25
CCDC58-202ENST00000460810 ZNF692Q9BU19 519 aaPredicted RBP13.44□□□□□ -0.26
CCDC58-202ENST00000460810 SSUH2Q9Y2M2 353 aa13.43□□□□□ -0.26
CCDC58-202ENST00000460810 SP7Q8TDD2 431 aaPredicted RBP13.41□□□□□ -0.26
CCDC58-202ENST00000460810 SPDYE1Q8NFV5 336 aaPredicted RBP13.4□□□□□ -0.26
CCDC58-202ENST00000460810 HAX1O00165 279 aa13.34□□□□□ -0.27
CCDC58-202ENST00000460810 CLEC11AQ9Y240 323 aa13.33□□□□□ -0.28
CCDC58-202ENST00000460810 PRKAR2AP13861 404 aaKnown RBP13.25□□□□□ -0.29
CCDC58-202ENST00000460810 PABPN1Q86U42 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
CCDC58-202ENST00000460810 EHMT2Q96KQ7 1210 aa13.22□□□□□ -0.29
CCDC58-202ENST00000460810 PRR29P0C7W0 189 aa13.14□□□□□ -0.31
CCDC58-202ENST00000460810 EVX2Q03828 476 aa13.13□□□□□ -0.31
CCDC58-202ENST00000460810 C19orf67A6NJJ6 358 aa13.07□□□□□ -0.32
CCDC58-202ENST00000460810 CHADLQ6NUI6 762 aa13.05□□□□□ -0.32
CCDC58-202ENST00000460810 STAG3Q9UJ98 1225 aa12.93□□□□□ -0.34
CCDC58-202ENST00000460810 SPDYE4A6NLX3 237 aa12.91□□□□□ -0.34
CCDC58-202ENST00000460810 FARP1Q9Y4F1 1045 aaPredicted RBP12.9□□□□□ -0.34
CCDC58-202ENST00000460810 GABBR2O75899 941 aa12.88□□□□□ -0.35
CCDC58-202ENST00000460810 CD44P16070 742 aaKnown RBP12.82□□□□□ -0.36
CCDC58-202ENST00000460810 CLCN6P51797 869 aa12.78□□□□□ -0.36
CCDC58-202ENST00000460810 CREBZFQ9NS37 354 aa12.78□□□□□ -0.36
CCDC58-202ENST00000460810 ZNF579Q8NAF0 562 aaKnown RBP12.65□□□□□ -0.38
CCDC58-202ENST00000460810 ZRANB1Q9UGI0 708 aa12.64□□□□□ -0.39
CCDC58-202ENST00000460810 PROM2Q8N271 834 aa12.63□□□□□ -0.39
CCDC58-202ENST00000460810 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
CCDC58-202ENST00000460810 POTEIP0CG38 1075 aa12.58□□□□□ -0.4
CCDC58-202ENST00000460810 LHX8Q68G74 356 aa12.58□□□□□ -0.4
CCDC58-202ENST00000460810 PAK3O75914 559 aaPredicted RBP12.57□□□□□ -0.4
CCDC58-202ENST00000460810 MNX1P50219 401 aaPredicted RBP12.57□□□□□ -0.4
CCDC58-202ENST00000460810 DCBLD2Q96PD2 775 aa12.54□□□□□ -0.4
CCDC58-202ENST00000460810 GALR2O43603 387 aaPredicted RBP12.46□□□□□ -0.41
CCDC58-202ENST00000460810 PHF12Q96QT6 1004 aa12.42□□□□□ -0.42
CCDC58-202ENST00000460810 PLEKHG5O94827 1062 aa12.37□□□□□ -0.43
CCDC58-202ENST00000460810 MIER1Q8N108 512 aa12.33□□□□□ -0.44
CCDC58-202ENST00000460810 TSPYL2Q9H2G4 693 aaPredicted RBP12.3□□□□□ -0.44
CCDC58-202ENST00000460810 MS4A3Q96HJ5 214 aa12.28□□□□□ -0.44
CCDC58-202ENST00000460810 CCDC61Q9Y6R9 512 aa12.28□□□□□ -0.44
CCDC58-202ENST00000460810 ASTLQ6HA08 431 aaPredicted RBP12.24□□□□□ -0.45
CCDC58-202ENST00000460810 PLCD3Q8N3E9 789 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 1962 ms