RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 AEBP2Q6ZN18 517 aaPredicted RBP31.03■■■□□ 2.56
CCDC58-205ENST00000479899 CHIC1Q5VXU3 224 aa30.3■■■□□ 2.44
CCDC58-205ENST00000479899 NISCHQ9Y2I1 1504 aa27.21■■□□□ 1.95
CCDC58-205ENST00000479899 PHF23Q9BUL5 403 aaPredicted RBP26.61■■□□□ 1.85
CCDC58-205ENST00000479899 SENP3Q9H4L4 574 aaPredicted RBP26.38■■□□□ 1.81
CCDC58-205ENST00000479899 ABCC9O60706 1549 aa24.81■■□□□ 1.56
CCDC58-205ENST00000479899 PLPPR3Q6T4P5 718 aa24.6■■□□□ 1.53
CCDC58-205ENST00000479899 CCDC180Q9P1Z9 1646 aa24.56■■□□□ 1.52
CCDC58-205ENST00000479899 FOXD1Q16676 465 aa24.46■■□□□ 1.51
CCDC58-205ENST00000479899 PPP6R1Q9UPN7 881 aa23.49■■□□□ 1.35
CCDC58-205ENST00000479899 RB1CC1Q8TDY2 1594 aa23.47■■□□□ 1.35
CCDC58-205ENST00000479899 ADRA2BP18089 450 aa23.46■■□□□ 1.35
CCDC58-205ENST00000479899 DNAJC5BQ9UF47 199 aa23.36■■□□□ 1.33
CCDC58-205ENST00000479899 NACADO15069 1562 aa23.21■■□□□ 1.31
CCDC58-205ENST00000479899 DCAF8L2P0C7V8 631 aa23.14■■□□□ 1.29
CCDC58-205ENST00000479899 PIAS4Q8N2W9 510 aaPredicted RBP23.05■■□□□ 1.28
CCDC58-205ENST00000479899 PABPN1Q86U42 306 aaKnown RBP eCLIP23.03■■□□□ 1.28
CCDC58-205ENST00000479899 UNC13AQ9UPW8 1703 aa23.01■■□□□ 1.27
CCDC58-205ENST00000479899 BICRAQ9NZM4 1560 aa22.79■■□□□ 1.24
CCDC58-205ENST00000479899 MYO15BQ96JP2 1530 aa22.75■■□□□ 1.23
CCDC58-205ENST00000479899 MSH5O43196 834 aa22.63■■□□□ 1.21
CCDC58-205ENST00000479899 ZCCHC6Q5VYS8 1495 aaKnown RBP22.53■■□□□ 1.2
CCDC58-205ENST00000479899 SCRIBQ14160 1630 aa22.45■■□□□ 1.18
CCDC58-205ENST00000479899 DCAF1Q9Y4B6 1507 aa22.41■■□□□ 1.18
CCDC58-205ENST00000479899 SHROOM4Q9ULL8 1493 aa22.39■■□□□ 1.17
CCDC58-205ENST00000479899 CC2D2AQ9P2K1 1620 aa22.38■■□□□ 1.17
CCDC58-205ENST00000479899 CECR2Q9BXF3 1484 aa22.32■■□□□ 1.16
CCDC58-205ENST00000479899 EIF4G1Q04637 1599 aaKnown RBP22.27■■□□□ 1.16
CCDC58-205ENST00000479899 PPP4R3CPQ6ZMV5 832 aa21.64■■□□□ 1.05
CCDC58-205ENST00000479899 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
CCDC58-205ENST00000479899 DNAJC5Q9H3Z4 198 aa21.55■■□□□ 1.04
CCDC58-205ENST00000479899 ERCC6Q03468 1493 aa21.44■■□□□ 1.02
CCDC58-205ENST00000479899 CUX2O14529 1486 aa21.39■■□□□ 1.02
CCDC58-205ENST00000479899 NCAPD3P42695 1498 aa21.39■■□□□ 1.01
CCDC58-205ENST00000479899 ATAD2BQ9ULI0 1458 aa21.34■■□□□ 1.01
CCDC58-205ENST00000479899 SMARCA4P51532 1647 aa21.33■■□□□ 1.01
CCDC58-205ENST00000479899 SMARCA2P51531 1590 aa21.29■■□□□ 1
CCDC58-205ENST00000479899 MAPK8IP2Q13387 824 aaPredicted RBP21.29■■□□□ 1
CCDC58-205ENST00000479899 HMGXB3Q12766 1538 aa21.28■■□□□ 1
CCDC58-205ENST00000479899 NESP48681 1621 aa21.24■□□□□ 0.99
CCDC58-205ENST00000479899 BAZ1BQ9UIG0 1483 aaKnown RBP21.18■□□□□ 0.98
CCDC58-205ENST00000479899 BAZ1AQ9NRL2 1556 aaPredicted RBP21.15■□□□□ 0.98
CCDC58-205ENST00000479899 NCBP3Q53F19 620 aaKnown RBP21.11■□□□□ 0.97
CCDC58-205ENST00000479899 THOC2Q8NI27 1593 aaKnown RBP21.08■□□□□ 0.97
CCDC58-205ENST00000479899 CNKSR2Q8WXI2 1034 aa21.08■□□□□ 0.97
CCDC58-205ENST00000479899 KCNA4P22459 653 aa21.06■□□□□ 0.96
CCDC58-205ENST00000479899 PEG3Q9GZU2 1588 aa21.05■□□□□ 0.96
CCDC58-205ENST00000479899 DMRT2Q9Y5R5 561 aa21.04■□□□□ 0.96
CCDC58-205ENST00000479899 LAMC3Q9Y6N6 1575 aa21.02■□□□□ 0.95
CCDC58-205ENST00000479899 KIF21AQ7Z4S6 1674 aa21.01■□□□□ 0.95
CCDC58-205ENST00000479899 MROH2BQ7Z745 1585 aa21■□□□□ 0.95
CCDC58-205ENST00000479899 PDS5BQ9NTI5 1447 aa20.87■□□□□ 0.93
CCDC58-205ENST00000479899 WIZO95785 1651 aa20.79■□□□□ 0.92
CCDC58-205ENST00000479899 CADPSQ9ULU8 1353 aa20.75■□□□□ 0.91
CCDC58-205ENST00000479899 MRC2Q9UBG0 1479 aa20.75■□□□□ 0.91
CCDC58-205ENST00000479899 NPM3O75607 178 aaKnown RBP20.74■□□□□ 0.91
CCDC58-205ENST00000479899 WDR62O43379 1518 aa20.7■□□□□ 0.9
CCDC58-205ENST00000479899 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
CCDC58-205ENST00000479899 RNF216Q9NWF9 866 aaPredicted RBP20.68■□□□□ 0.9
CCDC58-205ENST00000479899 CEP164Q9UPV0 1460 aa20.64■□□□□ 0.89
CCDC58-205ENST00000479899 POTEDQ86YR6 584 aa20.64■□□□□ 0.89
CCDC58-205ENST00000479899 HOXD11P31277 338 aaPredicted RBP20.61■□□□□ 0.89
CCDC58-205ENST00000479899 FANCD2Q9BXW9 1451 aa20.57■□□□□ 0.88
CCDC58-205ENST00000479899 CFTRP13569 1480 aa20.47■□□□□ 0.87
CCDC58-205ENST00000479899 TOP2AP11388 1531 aaKnown RBP20.47■□□□□ 0.87
CCDC58-205ENST00000479899 RSF1Q96T23 1441 aaPredicted RBP20.44■□□□□ 0.86
CCDC58-205ENST00000479899 URB2Q14146 1524 aaKnown RBP20.43■□□□□ 0.86
CCDC58-205ENST00000479899 PRDM2Q13029 1718 aa20.37■□□□□ 0.85
CCDC58-205ENST00000479899 OSCARQ8IYS5 282 aa20.34■□□□□ 0.85
CCDC58-205ENST00000479899 ZNF608Q9ULD9 1512 aaPredicted RBP20.22■□□□□ 0.83
CCDC58-205ENST00000479899 RIMBP3CA6NJZ7 1639 aa20.22■□□□□ 0.83
CCDC58-205ENST00000479899 RIMBP3BA6NNM3 1639 aa20.22■□□□□ 0.83
CCDC58-205ENST00000479899 RIMBP3Q9UFD9 1639 aa20.22■□□□□ 0.83
CCDC58-205ENST00000479899 CCDC88BA6NC98 1476 aa20.21■□□□□ 0.83
CCDC58-205ENST00000479899 IFT140Q96RY7 1462 aa20.19■□□□□ 0.82
CCDC58-205ENST00000479899 TOPBP1Q92547 1522 aa20.17■□□□□ 0.82
CCDC58-205ENST00000479899 EIF4G3O43432 1585 aaKnown RBP20.15■□□□□ 0.82
CCDC58-205ENST00000479899 DCAF8L1A6NGE4 600 aa20.1■□□□□ 0.81
CCDC58-205ENST00000479899 DNMBPQ6XZF7 1577 aa20.09■□□□□ 0.81
CCDC58-205ENST00000479899 ARHGEF11O15085 1522 aa20.09■□□□□ 0.81
CCDC58-205ENST00000479899 SLC4A1APQ9BWU0 796 aaKnown RBP20.07■□□□□ 0.8
CCDC58-205ENST00000479899 CHD1O14646 1710 aa20.06■□□□□ 0.8
CCDC58-205ENST00000479899 ABCC8Q09428 1581 aa20.04■□□□□ 0.8
CCDC58-205ENST00000479899 TARBP1Q13395 1621 aaKnown RBP20.01■□□□□ 0.79
CCDC58-205ENST00000479899 AQRO60306 1485 aaKnown RBP eCLIP19.99■□□□□ 0.79
CCDC58-205ENST00000479899 POLA1P09884 1462 aaPredicted RBP19.94■□□□□ 0.78
CCDC58-205ENST00000479899 FBLN2P98095 1184 aa19.94■□□□□ 0.78
CCDC58-205ENST00000479899 CYB5RLQ6IPT4 315 aa19.93■□□□□ 0.78
CCDC58-205ENST00000479899 RAD54L2Q9Y4B4 1467 aa19.9■□□□□ 0.78
CCDC58-205ENST00000479899 ARAP1Q96P48 1450 aa19.88■□□□□ 0.77
CCDC58-205ENST00000479899 TDRD9Q8NDG6 1382 aaKnown RBP19.83■□□□□ 0.77
CCDC58-205ENST00000479899 TRHP20396 242 aaPredicted RBP19.83■□□□□ 0.77
CCDC58-205ENST00000479899 SNAPC4Q5SXM2 1469 aa19.83■□□□□ 0.76
CCDC58-205ENST00000479899 SOGA1O94964 1423 aa19.83■□□□□ 0.76
CCDC58-205ENST00000479899 FGD5Q6ZNL6 1462 aa19.81■□□□□ 0.76
CCDC58-205ENST00000479899 WDR97A6NE52 1622 aa19.75■□□□□ 0.75
CCDC58-205ENST00000479899 CUX1P39880 1505 aa19.75■□□□□ 0.75
CCDC58-205ENST00000479899 CLASP1Q7Z460 1538 aa19.75■□□□□ 0.75
CCDC58-205ENST00000479899 SYNJ1O43426 1573 aa19.74■□□□□ 0.75
CCDC58-205ENST00000479899 CHMP7Q8WUX9 453 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms