RNA–Protein interactions for RNA: ENST00000530170.1

RPS3-215, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-215ENST00000530170 NISCHQ9Y2I1 1504 aa19.86■□□□□ 0.77
RPS3-215ENST00000530170 ABCC9O60706 1549 aa17.93■□□□□ 0.46
RPS3-215ENST00000530170 CHIC1Q5VXU3 224 aa17.93■□□□□ 0.46
RPS3-215ENST00000530170 DNAJC5BQ9UF47 199 aa17.54■□□□□ 0.4
RPS3-215ENST00000530170 AEBP2Q6ZN18 517 aaPredicted RBP17.51■□□□□ 0.39
RPS3-215ENST00000530170 CCDC180Q9P1Z9 1646 aa17.33■□□□□ 0.37
RPS3-215ENST00000530170 ZCCHC6Q5VYS8 1495 aaKnown RBP16.86■□□□□ 0.29
RPS3-215ENST00000530170 PABPN1Q86U42 306 aaKnown RBP eCLIP16.71■□□□□ 0.27
RPS3-215ENST00000530170 DNAJC5Q9H3Z4 198 aa16.64■□□□□ 0.25
RPS3-215ENST00000530170 DCAF1Q9Y4B6 1507 aa16.63■□□□□ 0.25
RPS3-215ENST00000530170 RB1CC1Q8TDY2 1594 aa16.63■□□□□ 0.25
RPS3-215ENST00000530170 DCAF8L2P0C7V8 631 aa16.46■□□□□ 0.23
RPS3-215ENST00000530170 NACADO15069 1562 aa16.34■□□□□ 0.21
RPS3-215ENST00000530170 MYO15BQ96JP2 1530 aa16.28■□□□□ 0.2
RPS3-215ENST00000530170 CECR2Q9BXF3 1484 aa16.22■□□□□ 0.19
RPS3-215ENST00000530170 SHROOM4Q9ULL8 1493 aa16.13■□□□□ 0.17
RPS3-215ENST00000530170 BICRAQ9NZM4 1560 aa16.13■□□□□ 0.17
RPS3-215ENST00000530170 UNC13AQ9UPW8 1703 aa16.08■□□□□ 0.16
RPS3-215ENST00000530170 CC2D2AQ9P2K1 1620 aa16.05■□□□□ 0.16
RPS3-215ENST00000530170 PHF23Q9BUL5 403 aaPredicted RBP15.88■□□□□ 0.13
RPS3-215ENST00000530170 EIF4G1Q04637 1599 aaKnown RBP15.83■□□□□ 0.13
RPS3-215ENST00000530170 SUPT5HO00267 1087 aaKnown RBP15.72■□□□□ 0.11
RPS3-215ENST00000530170 TRIM41Q8WV44 630 aa15.71■□□□□ 0.11
RPS3-215ENST00000530170 SCRIBQ14160 1630 aa15.7■□□□□ 0.1
RPS3-215ENST00000530170 CUX2O14529 1486 aa15.67■□□□□ 0.1
RPS3-215ENST00000530170 ERCC6Q03468 1493 aa15.56■□□□□ 0.08
RPS3-215ENST00000530170 RSF1Q96T23 1441 aaPredicted RBP15.51■□□□□ 0.07
RPS3-215ENST00000530170 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
RPS3-215ENST00000530170 MROH2BQ7Z745 1585 aa15.28■□□□□ 0.04
RPS3-215ENST00000530170 SMARCA4P51532 1647 aa15.21■□□□□ 0.03
RPS3-215ENST00000530170 WIZO95785 1651 aa15.2■□□□□ 0.02
RPS3-215ENST00000530170 TOP2AP11388 1531 aaKnown RBP15.18■□□□□ 0.02
RPS3-215ENST00000530170 NESP48681 1621 aa15.16■□□□□ 0.02
RPS3-215ENST00000530170 NCAPD3P42695 1498 aa15.14■□□□□ 0.01
RPS3-215ENST00000530170 PEG3Q9GZU2 1588 aa15.13■□□□□ 0.01
RPS3-215ENST00000530170 OSCARQ8IYS5 282 aa15.02■□□□□ -0
RPS3-215ENST00000530170 SMARCA2P51531 1590 aa15.02□□□□□ -0.01
RPS3-215ENST00000530170 THOC2Q8NI27 1593 aaKnown RBP15.01□□□□□ -0.01
RPS3-215ENST00000530170 ATAD2BQ9ULI0 1458 aa15□□□□□ -0.01
RPS3-215ENST00000530170 PLPPR3Q6T4P5 718 aa14.95□□□□□ -0.02
RPS3-215ENST00000530170 PDS5BQ9NTI5 1447 aa14.92□□□□□ -0.02
RPS3-215ENST00000530170 HMGXB3Q12766 1538 aa14.87□□□□□ -0.03
RPS3-215ENST00000530170 TRHP20396 242 aaPredicted RBP14.87□□□□□ -0.03
RPS3-215ENST00000530170 CCDC88BA6NC98 1476 aa14.87□□□□□ -0.03
RPS3-215ENST00000530170 LAMC3Q9Y6N6 1575 aa14.85□□□□□ -0.03
RPS3-215ENST00000530170 BAZ1BQ9UIG0 1483 aaKnown RBP14.82□□□□□ -0.04
RPS3-215ENST00000530170 EEA1Q15075 1411 aa14.79□□□□□ -0.04
RPS3-215ENST00000530170 KIF21AQ7Z4S6 1674 aa14.79□□□□□ -0.04
RPS3-215ENST00000530170 MRC2Q9UBG0 1479 aa14.77□□□□□ -0.04
RPS3-215ENST00000530170 CYB5RLQ6IPT4 315 aa14.76□□□□□ -0.05
RPS3-215ENST00000530170 HRCP23327 699 aa14.74□□□□□ -0.05
RPS3-215ENST00000530170 SENP3Q9H4L4 574 aaPredicted RBP14.72□□□□□ -0.05
RPS3-215ENST00000530170 CADPSQ9ULU8 1353 aa14.71□□□□□ -0.06
RPS3-215ENST00000530170 LOC105371045A0A1W2PR82 267 aa14.7□□□□□ -0.06
RPS3-215ENST00000530170 WDR62O43379 1518 aa14.7□□□□□ -0.06
RPS3-215ENST00000530170 RIMBP3CA6NJZ7 1639 aa14.69□□□□□ -0.06
RPS3-215ENST00000530170 RIMBP3BA6NNM3 1639 aa14.69□□□□□ -0.06
RPS3-215ENST00000530170 RIMBP3Q9UFD9 1639 aa14.69□□□□□ -0.06
RPS3-215ENST00000530170 ABCC8Q09428 1581 aa14.68□□□□□ -0.06
RPS3-215ENST00000530170 TRIM26Q12899 539 aaPredicted RBP14.63□□□□□ -0.07
RPS3-215ENST00000530170 ARHGEF11O15085 1522 aa14.61□□□□□ -0.07
RPS3-215ENST00000530170 PRDM2Q13029 1718 aa14.61□□□□□ -0.07
RPS3-215ENST00000530170 WRNQ14191 1432 aaPredicted RBP eCLIP14.6□□□□□ -0.078e-7■□□□□ 9.9
RPS3-215ENST00000530170 KIF21BO75037 1637 aa14.6□□□□□ -0.07
RPS3-215ENST00000530170 BIVM-ERCC5R4GMW8 1640 aa14.59□□□□□ -0.07
RPS3-215ENST00000530170 PCGF6Q9BYE7 350 aa14.58□□□□□ -0.08
RPS3-215ENST00000530170 CEP164Q9UPV0 1460 aa14.57□□□□□ -0.08
RPS3-215ENST00000530170 SYNJ1O43426 1573 aa14.56□□□□□ -0.08
RPS3-215ENST00000530170 TOP2BQ02880 1626 aa14.55□□□□□ -0.08
RPS3-215ENST00000530170 TNIKQ9UKE5 1360 aa14.52□□□□□ -0.08
RPS3-215ENST00000530170 GOLGA3Q08378 1498 aa14.51□□□□□ -0.09
RPS3-215ENST00000530170 FANCD2Q9BXW9 1451 aa14.51□□□□□ -0.09
RPS3-215ENST00000530170 SOGA1O94964 1423 aa14.45□□□□□ -0.1
RPS3-215ENST00000530170 CEP162Q5TB80 1403 aa14.44□□□□□ -0.1
RPS3-215ENST00000530170 FBLN2P98095 1184 aa14.42□□□□□ -0.1
RPS3-215ENST00000530170 FAM9AQ8IZU1 332 aaPredicted RBP14.42□□□□□ -0.1
RPS3-215ENST00000530170 ARAP1Q96P48 1450 aa14.42□□□□□ -0.1
RPS3-215ENST00000530170 ERICH3Q5RHP9 1530 aa14.41□□□□□ -0.1
RPS3-215ENST00000530170 ZEB1P37275 1124 aaPredicted RBP14.41□□□□□ -0.1
RPS3-215ENST00000530170 ILDR1Q86SU0 546 aaPredicted RBP14.4□□□□□ -0.1
RPS3-215ENST00000530170 URB2Q14146 1524 aaKnown RBP14.4□□□□□ -0.1
RPS3-215ENST00000530170 CFTRP13569 1480 aa14.39□□□□□ -0.11
RPS3-215ENST00000530170 ZNF608Q9ULD9 1512 aaPredicted RBP14.38□□□□□ -0.11
RPS3-215ENST00000530170 CSRNP3Q8WYN3 585 aa14.37□□□□□ -0.11
RPS3-215ENST00000530170 RUSC2Q8N2Y8 1516 aa14.34□□□□□ -0.11
RPS3-215ENST00000530170 IFT140Q96RY7 1462 aa14.31□□□□□ -0.12
RPS3-215ENST00000530170 CUX1P39880 1505 aa14.3□□□□□ -0.12
RPS3-215ENST00000530170 PRXQ9BXM0 1461 aa14.27□□□□□ -0.12
RPS3-215ENST00000530170 VPS8Q8N3P4 1428 aa14.23□□□□□ -0.13
RPS3-215ENST00000530170 AQRO60306 1485 aaKnown RBP eCLIP14.21□□□□□ -0.133e-8■■■■■ 35.7
RPS3-215ENST00000530170 CLIP1P30622 1438 aa14.21□□□□□ -0.13
RPS3-215ENST00000530170 RAPGEF2Q9Y4G8 1499 aa14.2□□□□□ -0.14
RPS3-215ENST00000530170 KIF27Q86VH2 1401 aa14.19□□□□□ -0.14
RPS3-215ENST00000530170 EIF4G3O43432 1585 aaKnown RBP14.16□□□□□ -0.14
RPS3-215ENST00000530170 CHMP7Q8WUX9 453 aaPredicted RBP14.14□□□□□ -0.15
RPS3-215ENST00000530170 CHD1O14646 1710 aa14.14□□□□□ -0.15
RPS3-215ENST00000530170 TOPBP1Q92547 1522 aa14.12□□□□□ -0.15
RPS3-215ENST00000530170 DNMBPQ6XZF7 1577 aa14.11□□□□□ -0.15
RPS3-215ENST00000530170 UBTFP17480 764 aaKnown RBP14.1□□□□□ -0.15
RPS3-215ENST00000530170 PPARGC1BQ86YN6 1023 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms