RNA–Protein interactions for RNA: ENST00000461006.5

PEF1-202, Transcript of penta-EF-hand domain containing 1, humanhuman

TSL 5

Gene PEF1, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEF1-202ENST00000461006 NISCHQ9Y2I1 1504 aa29.36■■■□□ 2.29
PEF1-202ENST00000461006 CCDC180Q9P1Z9 1646 aa26.1■■□□□ 1.77
PEF1-202ENST00000461006 ABCC9O60706 1549 aa25.75■■□□□ 1.71
PEF1-202ENST00000461006 DCAF8L2P0C7V8 631 aa24.69■■□□□ 1.54
PEF1-202ENST00000461006 RB1CC1Q8TDY2 1594 aa24.66■■□□□ 1.54
PEF1-202ENST00000461006 NACADO15069 1562 aa24.59■■□□□ 1.53
PEF1-202ENST00000461006 ZCCHC6Q5VYS8 1495 aaKnown RBP24.42■■□□□ 1.5
PEF1-202ENST00000461006 MYO15BQ96JP2 1530 aa24.39■■□□□ 1.49
PEF1-202ENST00000461006 DCAF1Q9Y4B6 1507 aa24.25■■□□□ 1.47
PEF1-202ENST00000461006 UNC13AQ9UPW8 1703 aa24.1■■□□□ 1.45
PEF1-202ENST00000461006 PABPN1Q86U42 306 aaKnown RBP eCLIP24.08■■□□□ 1.45
PEF1-202ENST00000461006 BICRAQ9NZM4 1560 aa23.93■■□□□ 1.42
PEF1-202ENST00000461006 SCRIBQ14160 1630 aa23.88■■□□□ 1.41
PEF1-202ENST00000461006 DNAJC5BQ9UF47 199 aa23.77■■□□□ 1.4
PEF1-202ENST00000461006 SHROOM4Q9ULL8 1493 aa23.61■■□□□ 1.37
PEF1-202ENST00000461006 EIF4G1Q04637 1599 aaKnown RBP23.31■■□□□ 1.32
PEF1-202ENST00000461006 CC2D2AQ9P2K1 1620 aa23.25■■□□□ 1.31
PEF1-202ENST00000461006 CECR2Q9BXF3 1484 aa23.13■■□□□ 1.29
PEF1-202ENST00000461006 SMARCA4P51532 1647 aa22.8■■□□□ 1.24
PEF1-202ENST00000461006 BAZ1AQ9NRL2 1556 aaPredicted RBP22.76■■□□□ 1.23
PEF1-202ENST00000461006 ATAD2BQ9ULI0 1458 aa22.73■■□□□ 1.23
PEF1-202ENST00000461006 NCAPD3P42695 1498 aa22.72■■□□□ 1.23
PEF1-202ENST00000461006 SMARCA2P51531 1590 aa22.67■■□□□ 1.22
PEF1-202ENST00000461006 MROH2BQ7Z745 1585 aa22.65■■□□□ 1.22
PEF1-202ENST00000461006 HMGXB3Q12766 1538 aa22.57■■□□□ 1.2
PEF1-202ENST00000461006 PEG3Q9GZU2 1588 aa22.55■■□□□ 1.2
PEF1-202ENST00000461006 BAZ1BQ9UIG0 1483 aaKnown RBP22.53■■□□□ 1.2
PEF1-202ENST00000461006 WIZO95785 1651 aa22.39■■□□□ 1.18
PEF1-202ENST00000461006 RSF1Q96T23 1441 aaPredicted RBP22.35■■□□□ 1.17
PEF1-202ENST00000461006 NESP48681 1621 aa22.24■■□□□ 1.15
PEF1-202ENST00000461006 ERCC6Q03468 1493 aa22.19■■□□□ 1.14
PEF1-202ENST00000461006 TOP2AP11388 1531 aaKnown RBP22.12■■□□□ 1.13
PEF1-202ENST00000461006 LAMC3Q9Y6N6 1575 aa22.12■■□□□ 1.13
PEF1-202ENST00000461006 CADPSQ9ULU8 1353 aa22.07■■□□□ 1.12
PEF1-202ENST00000461006 PDS5BQ9NTI5 1447 aa22■■□□□ 1.11
PEF1-202ENST00000461006 CUX2O14529 1486 aa21.96■■□□□ 1.11
PEF1-202ENST00000461006 KIF21AQ7Z4S6 1674 aa21.94■■□□□ 1.1
PEF1-202ENST00000461006 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
PEF1-202ENST00000461006 CFTRP13569 1480 aa21.9■■□□□ 1.1
PEF1-202ENST00000461006 THOC2Q8NI27 1593 aaKnown RBP21.88■■□□□ 1.09
PEF1-202ENST00000461006 FANCD2Q9BXW9 1451 aa21.82■■□□□ 1.08
PEF1-202ENST00000461006 CEP164Q9UPV0 1460 aa21.79■■□□□ 1.08
PEF1-202ENST00000461006 MRC2Q9UBG0 1479 aa21.77■■□□□ 1.08
PEF1-202ENST00000461006 SUPT5HO00267 1087 aaKnown RBP21.77■■□□□ 1.08
PEF1-202ENST00000461006 WDR62O43379 1518 aa21.69■■□□□ 1.06
PEF1-202ENST00000461006 PRDM2Q13029 1718 aa21.67■■□□□ 1.06
PEF1-202ENST00000461006 URB2Q14146 1524 aaKnown RBP21.6■■□□□ 1.05
PEF1-202ENST00000461006 DNAJC5Q9H3Z4 198 aa21.47■■□□□ 1.03
PEF1-202ENST00000461006 TOPBP1Q92547 1522 aa21.45■■□□□ 1.02
PEF1-202ENST00000461006 ABCC8Q09428 1581 aa21.41■■□□□ 1.02
PEF1-202ENST00000461006 DNMBPQ6XZF7 1577 aa21.4■■□□□ 1.02
PEF1-202ENST00000461006 IFT140Q96RY7 1462 aa21.33■■□□□ 1.01
PEF1-202ENST00000461006 ZNF608Q9ULD9 1512 aaPredicted RBP21.28■■□□□ 1
PEF1-202ENST00000461006 POLA1P09884 1462 aaPredicted RBP21.26■□□□□ 0.99
PEF1-202ENST00000461006 CUX1P39880 1505 aa21.25■□□□□ 0.99
PEF1-202ENST00000461006 RAD54L2Q9Y4B4 1467 aa21.2■□□□□ 0.98
PEF1-202ENST00000461006 TARBP1Q13395 1621 aaKnown RBP21.2■□□□□ 0.98
PEF1-202ENST00000461006 FGD5Q6ZNL6 1462 aa21.2■□□□□ 0.98
PEF1-202ENST00000461006 SOGA1O94964 1423 aa21.19■□□□□ 0.98
PEF1-202ENST00000461006 AQRO60306 1485 aaKnown RBP eCLIP21.15■□□□□ 0.981e-7■■■■■ 29.4
PEF1-202ENST00000461006 EIF4G3O43432 1585 aaKnown RBP21.14■□□□□ 0.98
PEF1-202ENST00000461006 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
PEF1-202ENST00000461006 OSCARQ8IYS5 282 aa21.08■□□□□ 0.97
PEF1-202ENST00000461006 WRNQ14191 1432 aaPredicted RBP eCLIP21.07■□□□□ 0.96
PEF1-202ENST00000461006 SYNJ1O43426 1573 aa21.02■□□□□ 0.96
PEF1-202ENST00000461006 TOP2BQ02880 1626 aa21.01■□□□□ 0.95
PEF1-202ENST00000461006 BIVM-ERCC5R4GMW8 1640 aa21■□□□□ 0.95
PEF1-202ENST00000461006 WDR97A6NE52 1622 aa20.99■□□□□ 0.95
PEF1-202ENST00000461006 ABCA10Q8WWZ4 1543 aa20.98■□□□□ 0.95
PEF1-202ENST00000461006 FBLN2P98095 1184 aa20.96■□□□□ 0.95
PEF1-202ENST00000461006 GRIN2BQ13224 1484 aa20.94■□□□□ 0.94
PEF1-202ENST00000461006 GAPVD1Q14C86 1478 aa20.94■□□□□ 0.94
PEF1-202ENST00000461006 SNAPC4Q5SXM2 1469 aa20.94■□□□□ 0.94
PEF1-202ENST00000461006 CHD1O14646 1710 aa20.91■□□□□ 0.94
PEF1-202ENST00000461006 ABCA5Q8WWZ7 1642 aa20.88■□□□□ 0.93
PEF1-202ENST00000461006 MAGI1Q96QZ7 1491 aaPredicted RBP20.88■□□□□ 0.93
PEF1-202ENST00000461006 PBRM1Q86U86 1689 aa20.86■□□□□ 0.93
PEF1-202ENST00000461006 CHMP7Q8WUX9 453 aaPredicted RBP20.86■□□□□ 0.93
PEF1-202ENST00000461006 SYNJ2O15056 1496 aa20.8■□□□□ 0.92
PEF1-202ENST00000461006 TRIM41Q8WV44 630 aa20.76■□□□□ 0.91
PEF1-202ENST00000461006 RIMBP3CA6NJZ7 1639 aa20.72■□□□□ 0.91
PEF1-202ENST00000461006 RIMBP3BA6NNM3 1639 aa20.72■□□□□ 0.91
PEF1-202ENST00000461006 RIMBP3Q9UFD9 1639 aa20.72■□□□□ 0.91
PEF1-202ENST00000461006 ARHGEF11O15085 1522 aa20.71■□□□□ 0.91
PEF1-202ENST00000461006 ERICH3Q5RHP9 1530 aa20.7■□□□□ 0.9
PEF1-202ENST00000461006 ADAMTS12P58397 1594 aa20.7■□□□□ 0.9
PEF1-202ENST00000461006 FHAD1B1AJZ9 1412 aa20.68■□□□□ 0.9
PEF1-202ENST00000461006 CLASP1Q7Z460 1538 aa20.68■□□□□ 0.9
PEF1-202ENST00000461006 GRIN2AQ12879 1464 aa20.66■□□□□ 0.9
PEF1-202ENST00000461006 KIF27Q86VH2 1401 aa20.64■□□□□ 0.89
PEF1-202ENST00000461006 IGF1RP08069 1367 aa20.59■□□□□ 0.89
PEF1-202ENST00000461006 CYB5RLQ6IPT4 315 aa20.58■□□□□ 0.89
PEF1-202ENST00000461006 NUP160Q12769 1436 aa20.57■□□□□ 0.88
PEF1-202ENST00000461006 CEP170Q5SW79 1584 aa20.56■□□□□ 0.88
PEF1-202ENST00000461006 ARAP1Q96P48 1450 aa20.55■□□□□ 0.88
PEF1-202ENST00000461006 CUL7Q14999 1698 aa20.48■□□□□ 0.87
PEF1-202ENST00000461006 CARMIL1Q5VZK9 1371 aa20.47■□□□□ 0.87
PEF1-202ENST00000461006 RUSC2Q8N2Y8 1516 aa20.45■□□□□ 0.86
PEF1-202ENST00000461006 ERCC6L2Q5T890 1561 aa20.42■□□□□ 0.86
PEF1-202ENST00000461006 JPH4Q96JJ6 628 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms