RNA–Protein interactions for RNA: ENST00000497726.5

CCDC58-206, Transcript of coiled-coil domain containing 58, humanhuman

TSL 5 BASIC

Gene CCDC58, Length 438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-206ENST00000497726 NISCHQ9Y2I1 1504 aa24.2■■□□□ 1.46
CCDC58-206ENST00000497726 AEBP2Q6ZN18 517 aaPredicted RBP23.69■■□□□ 1.38
CCDC58-206ENST00000497726 ABCC9O60706 1549 aa23.33■■□□□ 1.33
CCDC58-206ENST00000497726 DNAJC5BQ9UF47 199 aa22.98■■□□□ 1.27
CCDC58-206ENST00000497726 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
CCDC58-206ENST00000497726 CCDC180Q9P1Z9 1646 aa22.07■■□□□ 1.12
CCDC58-206ENST00000497726 DNAJC5Q9H3Z4 198 aa21.82■■□□□ 1.08
CCDC58-206ENST00000497726 PABPN1Q86U42 306 aaKnown RBP eCLIP21.63■■□□□ 1.05
CCDC58-206ENST00000497726 RB1CC1Q8TDY2 1594 aa21.6■■□□□ 1.05
CCDC58-206ENST00000497726 NACADO15069 1562 aa21.18■□□□□ 0.98
CCDC58-206ENST00000497726 UNC13AQ9UPW8 1703 aa21.12■□□□□ 0.97
CCDC58-206ENST00000497726 CECR2Q9BXF3 1484 aa21.1■□□□□ 0.97
CCDC58-206ENST00000497726 BICRAQ9NZM4 1560 aa21.08■□□□□ 0.97
CCDC58-206ENST00000497726 DCAF8L2P0C7V8 631 aa21.06■□□□□ 0.96
CCDC58-206ENST00000497726 CC2D2AQ9P2K1 1620 aa20.96■□□□□ 0.95
CCDC58-206ENST00000497726 EIF4G1Q04637 1599 aaKnown RBP20.63■□□□□ 0.89
CCDC58-206ENST00000497726 SHROOM4Q9ULL8 1493 aa20.53■□□□□ 0.88
CCDC58-206ENST00000497726 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
CCDC58-206ENST00000497726 TRIM41Q8WV44 630 aa20.47■□□□□ 0.87
CCDC58-206ENST00000497726 CUX2O14529 1486 aa20.46■□□□□ 0.87
CCDC58-206ENST00000497726 SENP3Q9H4L4 574 aaPredicted RBP20.33■□□□□ 0.85
CCDC58-206ENST00000497726 ERCC6Q03468 1493 aa20.18■□□□□ 0.82
CCDC58-206ENST00000497726 SCRIBQ14160 1630 aa20.17■□□□□ 0.82
CCDC58-206ENST00000497726 PHF23Q9BUL5 403 aaPredicted RBP19.98■□□□□ 0.79
CCDC58-206ENST00000497726 ZCCHC6Q5VYS8 1495 aaKnown RBP19.98■□□□□ 0.79
CCDC58-206ENST00000497726 DCAF1Q9Y4B6 1507 aa19.83■□□□□ 0.77
CCDC58-206ENST00000497726 NESP48681 1621 aa19.75■□□□□ 0.75
CCDC58-206ENST00000497726 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
CCDC58-206ENST00000497726 NCAPD3P42695 1498 aa19.62■□□□□ 0.73
CCDC58-206ENST00000497726 SMARCA2P51531 1590 aa19.51■□□□□ 0.71
CCDC58-206ENST00000497726 OSCARQ8IYS5 282 aa19.43■□□□□ 0.7
CCDC58-206ENST00000497726 ATAD2BQ9ULI0 1458 aa19.42■□□□□ 0.7
CCDC58-206ENST00000497726 BAZ1AQ9NRL2 1556 aaPredicted RBP19.37■□□□□ 0.69
CCDC58-206ENST00000497726 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
CCDC58-206ENST00000497726 HMGXB3Q12766 1538 aa19.31■□□□□ 0.68
CCDC58-206ENST00000497726 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
CCDC58-206ENST00000497726 PDS5BQ9NTI5 1447 aa19.26■□□□□ 0.67
CCDC58-206ENST00000497726 RIMBP3CA6NJZ7 1639 aa19.25■□□□□ 0.67
CCDC58-206ENST00000497726 RIMBP3BA6NNM3 1639 aa19.25■□□□□ 0.67
CCDC58-206ENST00000497726 RIMBP3Q9UFD9 1639 aa19.25■□□□□ 0.67
CCDC58-206ENST00000497726 TRHP20396 242 aaPredicted RBP19.25■□□□□ 0.67
CCDC58-206ENST00000497726 MRC2Q9UBG0 1479 aa19.17■□□□□ 0.66
CCDC58-206ENST00000497726 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
CCDC58-206ENST00000497726 WDR62O43379 1518 aa19.15■□□□□ 0.66
CCDC58-206ENST00000497726 CYB5RLQ6IPT4 315 aa19.12■□□□□ 0.65
CCDC58-206ENST00000497726 ARHGEF11O15085 1522 aa19.09■□□□□ 0.65
CCDC58-206ENST00000497726 SMARCA4P51532 1647 aa19.08■□□□□ 0.65
CCDC58-206ENST00000497726 CADPSQ9ULU8 1353 aa18.99■□□□□ 0.63
CCDC58-206ENST00000497726 FOXD1Q16676 465 aa18.97■□□□□ 0.63
CCDC58-206ENST00000497726 ILDR1Q86SU0 546 aaPredicted RBP18.89■□□□□ 0.61
CCDC58-206ENST00000497726 CEP164Q9UPV0 1460 aa18.87■□□□□ 0.61
CCDC58-206ENST00000497726 PEG3Q9GZU2 1588 aa18.86■□□□□ 0.61
CCDC58-206ENST00000497726 ARAP1Q96P48 1450 aa18.84■□□□□ 0.61
CCDC58-206ENST00000497726 FANCD2Q9BXW9 1451 aa18.78■□□□□ 0.6
CCDC58-206ENST00000497726 URB2Q14146 1524 aaKnown RBP18.71■□□□□ 0.59
CCDC58-206ENST00000497726 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
CCDC58-206ENST00000497726 MROH2BQ7Z745 1585 aa18.68■□□□□ 0.58
CCDC58-206ENST00000497726 RSF1Q96T23 1441 aaPredicted RBP18.57■□□□□ 0.56
CCDC58-206ENST00000497726 IFT140Q96RY7 1462 aa18.53■□□□□ 0.56
CCDC58-206ENST00000497726 FBLN2P98095 1184 aa18.53■□□□□ 0.56
CCDC58-206ENST00000497726 CFTRP13569 1480 aa18.52■□□□□ 0.56
CCDC58-206ENST00000497726 CHD1O14646 1710 aa18.52■□□□□ 0.55
CCDC58-206ENST00000497726 EIF4G3O43432 1585 aaKnown RBP18.45■□□□□ 0.54
CCDC58-206ENST00000497726 AQRO60306 1485 aaKnown RBP eCLIP18.4■□□□□ 0.54
CCDC58-206ENST00000497726 WIZO95785 1651 aa18.4■□□□□ 0.54
CCDC58-206ENST00000497726 KDM4FA0A1W2PPD8 638 aa18.31■□□□□ 0.52
CCDC58-206ENST00000497726 POTEDQ86YR6 584 aa18.3■□□□□ 0.52
CCDC58-206ENST00000497726 TOPBP1Q92547 1522 aa18.29■□□□□ 0.52
CCDC58-206ENST00000497726 CLASP1Q7Z460 1538 aa18.28■□□□□ 0.52
CCDC58-206ENST00000497726 GAPVD1Q14C86 1478 aa18.22■□□□□ 0.51
CCDC58-206ENST00000497726 TARBP1Q13395 1621 aaKnown RBP18.2■□□□□ 0.5
CCDC58-206ENST00000497726 CHMP7Q8WUX9 453 aaPredicted RBP18.17■□□□□ 0.5
CCDC58-206ENST00000497726 SYNJ1O43426 1573 aa18.15■□□□□ 0.5
CCDC58-206ENST00000497726 SNAPC4Q5SXM2 1469 aa18.13■□□□□ 0.49
CCDC58-206ENST00000497726 TOP2AP11388 1531 aaKnown RBP18.13■□□□□ 0.49
CCDC58-206ENST00000497726 TDRD9Q8NDG6 1382 aaKnown RBP18.12■□□□□ 0.49
CCDC58-206ENST00000497726 PRDM2Q13029 1718 aa18.12■□□□□ 0.49
CCDC58-206ENST00000497726 ABCC8Q09428 1581 aa18.1■□□□□ 0.49
CCDC58-206ENST00000497726 DNMBPQ6XZF7 1577 aa18.08■□□□□ 0.49
CCDC58-206ENST00000497726 RAD54L2Q9Y4B4 1467 aa18.06■□□□□ 0.48
CCDC58-206ENST00000497726 KIF13AQ9H1H9 1805 aa18.05■□□□□ 0.48
CCDC58-206ENST00000497726 POLA1P09884 1462 aaPredicted RBP18.04■□□□□ 0.48
CCDC58-206ENST00000497726 ERCC6L2Q5T890 1561 aa18.01■□□□□ 0.47
CCDC58-206ENST00000497726 MAGI1Q96QZ7 1491 aaPredicted RBP17.97■□□□□ 0.47
CCDC58-206ENST00000497726 MSH5O43196 834 aa17.97■□□□□ 0.47
CCDC58-206ENST00000497726 FBXO41Q8TF61 875 aa17.97■□□□□ 0.47
CCDC58-206ENST00000497726 SOGA1O94964 1423 aa17.97■□□□□ 0.47
CCDC58-206ENST00000497726 SYNJ2O15056 1496 aa17.96■□□□□ 0.47
CCDC58-206ENST00000497726 FAM69CQ0P6D2 419 aa17.95■□□□□ 0.46
CCDC58-206ENST00000497726 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
CCDC58-206ENST00000497726 HECW2Q9P2P5 1572 aa17.92■□□□□ 0.46
CCDC58-206ENST00000497726 CCDC88BA6NC98 1476 aa17.9■□□□□ 0.46
CCDC58-206ENST00000497726 GRIN2BQ13224 1484 aa17.89■□□□□ 0.45
CCDC58-206ENST00000497726 KDM6BO15054 1643 aa17.88■□□□□ 0.45
CCDC58-206ENST00000497726 ABCC10Q5T3U5 1492 aa17.84■□□□□ 0.45
CCDC58-206ENST00000497726 LMTK3Q96Q04 1460 aa17.83■□□□□ 0.45
CCDC58-206ENST00000497726 ADGRL1O94910 1474 aa17.82■□□□□ 0.44
CCDC58-206ENST00000497726 WDR97A6NE52 1622 aa17.82■□□□□ 0.44
CCDC58-206ENST00000497726 CEP170Q5SW79 1584 aa17.8■□□□□ 0.44
CCDC58-206ENST00000497726 FGD5Q6ZNL6 1462 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms