Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.23■□□□□ 0.99
TPM3P06753 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPM3P06753 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TPM3P06753 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.23■□□□□ 0.99
TPM3P06753 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPM3P06753 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPM3P06753 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.23■□□□□ 0.99
TPM3P06753 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TPM3P06753 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TPM3P06753 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TPM3P06753 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPM3P06753 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
TPM3P06753 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPM3P06753 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM3P06753 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.22■□□□□ 0.99
TPM3P06753 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM3P06753 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TPM3P06753 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
TPM3P06753 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM3P06753 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM3P06753 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM3P06753 GPX1P1-201ENST00000388829 606 ntBASIC21.22■□□□□ 0.99
TPM3P06753 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM3P06753 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TPM3P06753 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TPM3P06753 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.22■□□□□ 0.99
TPM3P06753 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TPM3P06753 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.22■□□□□ 0.99
TPM3P06753 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.22■□□□□ 0.99
TPM3P06753 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM3P06753 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM3P06753 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.22■□□□□ 0.99
TPM3P06753 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM3P06753 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM3P06753 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.22■□□□□ 0.99
TPM3P06753 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.22■□□□□ 0.99
TPM3P06753 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM3P06753 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM3P06753 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TPM3P06753 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM3P06753 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.21■□□□□ 0.99
TPM3P06753 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPM3P06753 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
TPM3P06753 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.21■□□□□ 0.99
TPM3P06753 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPM3P06753 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPM3P06753 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TPM3P06753 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TPM3P06753 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
TPM3P06753 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPM3P06753 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TPM3P06753 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPM3P06753 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.21■□□□□ 0.99
TPM3P06753 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
TPM3P06753 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TPM3P06753 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPM3P06753 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.21■□□□□ 0.99
TPM3P06753 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.21■□□□□ 0.99
TPM3P06753 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPM3P06753 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TPM3P06753 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.21■□□□□ 0.99
TPM3P06753 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.21■□□□□ 0.99
TPM3P06753 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPM3P06753 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPM3P06753 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPM3P06753 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPM3P06753 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.21■□□□□ 0.99
TPM3P06753 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.21■□□□□ 0.99
TPM3P06753 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TPM3P06753 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.2■□□□□ 0.98
TPM3P06753 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
TPM3P06753 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TPM3P06753 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.2■□□□□ 0.98
TPM3P06753 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TPM3P06753 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TPM3P06753 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.2■□□□□ 0.98
TPM3P06753 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.2■□□□□ 0.98
TPM3P06753 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TPM3P06753 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TPM3P06753 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
TPM3P06753 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TPM3P06753 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TPM3P06753 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TPM3P06753 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.2■□□□□ 0.98
TPM3P06753 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.2■□□□□ 0.98
TPM3P06753 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TPM3P06753 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TPM3P06753 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TPM3P06753 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.2■□□□□ 0.98
TPM3P06753 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
TPM3P06753 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TPM3P06753 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TPM3P06753 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TPM3P06753 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TPM3P06753 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TPM3P06753 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TPM3P06753 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TPM3P06753 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.19■□□□□ 0.98
TPM3P06753 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.19■□□□□ 0.98
TPM3P06753 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms