Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 PRKY-204ENST00000533551 1019 ntBASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 AC142086.2-201ENST00000569753 217 ntBASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.08■□□□□ 0.65
TCRBV9S1A1TA0A576 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV9S1A1TA0A576 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV9S1A1TA0A576 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV9S1A1TA0A576 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.08■□□□□ 0.64
TCRBV9S1A1TA0A576 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV9S1A1TA0A576 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.08■□□□□ 0.64
TCRBV9S1A1TA0A576 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV9S1A1TA0A576 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.08■□□□□ 0.64
TCRBV9S1A1TA0A576 KRT8P41-201ENST00000533985 1514 ntBASIC19.08■□□□□ 0.64
TCRBV9S1A1TA0A576 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.08■□□□□ 0.64
TCRBV9S1A1TA0A576 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV9S1A1TA0A576 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.08■□□□□ 0.64
TCRBV9S1A1TA0A576 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV9S1A1TA0A576 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
TCRBV9S1A1TA0A576 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 UNC93B5-201ENST00000530315 699 ntBASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV9S1A1TA0A576 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV9S1A1TA0A576 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV9S1A1TA0A576 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV9S1A1TA0A576 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV9S1A1TA0A576 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.06■□□□□ 0.64
TCRBV9S1A1TA0A576 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV9S1A1TA0A576 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV9S1A1TA0A576 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.06■□□□□ 0.64
TCRBV9S1A1TA0A576 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.06■□□□□ 0.64
TCRBV9S1A1TA0A576 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.06■□□□□ 0.64
TCRBV9S1A1TA0A576 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.06■□□□□ 0.64
TCRBV9S1A1TA0A576 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV9S1A1TA0A576 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TCRBV9S1A1TA0A576 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TCRBV9S1A1TA0A576 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
TCRBV9S1A1TA0A576 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV9S1A1TA0A576 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV9S1A1TA0A576 NOC2LP2-201ENST00000407594 1944 ntBASIC19.06■□□□□ 0.64
TCRBV9S1A1TA0A576 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 HEIH-201ENST00000623091 1652 ntBASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 AC008403.3-201ENST00000598924 454 ntBASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 AC104771.1-201ENST00000603335 964 ntBASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms