Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF346Q9UL40 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ZNF346Q9UL40 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
ZNF346Q9UL40 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
ZNF346Q9UL40 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF346Q9UL40 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ZNF346Q9UL40 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF346Q9UL40 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ZNF346Q9UL40 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF346Q9UL40 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF346Q9UL40 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF346Q9UL40 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.07■□□□□ 0.32
ZNF346Q9UL40 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.06■□□□□ 0.32
ZNF346Q9UL40 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 AC009113.1-201ENST00000570267 2443 ntBASIC17.06■□□□□ 0.32
ZNF346Q9UL40 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF346Q9UL40 KRT8P41-201ENST00000533985 1514 ntBASIC17.06■□□□□ 0.32
ZNF346Q9UL40 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 AC142381.4-202ENST00000563973 229 ntBASIC17.05■□□□□ 0.32
ZNF346Q9UL40 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF346Q9UL40 AL031598.1-201ENST00000561511 1773 ntBASIC17.05■□□□□ 0.32
ZNF346Q9UL40 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 AC093525.10-201ENST00000625130 1569 ntBASIC17.04■□□□□ 0.32
ZNF346Q9UL40 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.04■□□□□ 0.32
ZNF346Q9UL40 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms