Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 AC139713.2-201ENST00000641328 2723 ntBASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ABCF3Q9NUQ8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 FP475955.4-201ENST00000623131 1990 ntBASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ABCF3Q9NUQ8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 RPS2P52-201ENST00000469610 820 ntBASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ABCF3Q9NUQ8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ABCF3Q9NUQ8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms