Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
HIPK3Q9H422 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.72■□□□□ 0.91
HIPK3Q9H422 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.72■□□□□ 0.91
HIPK3Q9H422 AC079781.3-201ENST00000449110 356 ntBASIC20.72■□□□□ 0.91
HIPK3Q9H422 FOSL1P1-201ENST00000511041 816 ntBASIC20.72■□□□□ 0.91
HIPK3Q9H422 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK3Q9H422 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.72■□□□□ 0.91
HIPK3Q9H422 MIR3917-201ENST00000580971 93 ntBASIC20.72■□□□□ 0.91
HIPK3Q9H422 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK3Q9H422 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK3Q9H422 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HIPK3Q9H422 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK3Q9H422 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.72■□□□□ 0.91
HIPK3Q9H422 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK3Q9H422 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HIPK3Q9H422 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK3Q9H422 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK3Q9H422 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HIPK3Q9H422 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK3Q9H422 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK3Q9H422 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.72■□□□□ 0.91
HIPK3Q9H422 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.72■□□□□ 0.91
HIPK3Q9H422 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HIPK3Q9H422 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIPK3Q9H422 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIPK3Q9H422 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIPK3Q9H422 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIPK3Q9H422 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIPK3Q9H422 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIPK3Q9H422 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIPK3Q9H422 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.71■□□□□ 0.91
HIPK3Q9H422 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.71■□□□□ 0.91
HIPK3Q9H422 TOB2P1-201ENST00000469761 992 ntBASIC20.71■□□□□ 0.91
HIPK3Q9H422 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.71■□□□□ 0.91
HIPK3Q9H422 AC012615.1-201ENST00000565797 1299 ntBASIC20.71■□□□□ 0.91
HIPK3Q9H422 RNF126P1-202ENST00000569893 925 ntBASIC20.71■□□□□ 0.91
HIPK3Q9H422 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.71■□□□□ 0.91
HIPK3Q9H422 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.71■□□□□ 0.91
HIPK3Q9H422 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIPK3Q9H422 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HIPK3Q9H422 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIPK3Q9H422 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.71■□□□□ 0.91
HIPK3Q9H422 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIPK3Q9H422 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIPK3Q9H422 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.71■□□□□ 0.91
HIPK3Q9H422 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HIPK3Q9H422 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
HIPK3Q9H422 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIPK3Q9H422 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIPK3Q9H422 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.7■□□□□ 0.9
HIPK3Q9H422 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIPK3Q9H422 SDHAP1-207ENST00000440850 2000 ntBASIC20.7■□□□□ 0.9
HIPK3Q9H422 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HIPK3Q9H422 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIPK3Q9H422 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HIPK3Q9H422 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.7■□□□□ 0.9
HIPK3Q9H422 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIPK3Q9H422 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HIPK3Q9H422 KRT18P31-201ENST00000506277 1292 ntBASIC20.7■□□□□ 0.9
HIPK3Q9H422 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIPK3Q9H422 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.7■□□□□ 0.9
HIPK3Q9H422 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
HIPK3Q9H422 AC006538.3-201ENST00000612495 578 ntBASIC20.7■□□□□ 0.9
HIPK3Q9H422 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.7■□□□□ 0.9
HIPK3Q9H422 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.7■□□□□ 0.9
HIPK3Q9H422 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIPK3Q9H422 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIPK3Q9H422 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.7■□□□□ 0.9
HIPK3Q9H422 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HIPK3Q9H422 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HIPK3Q9H422 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.69■□□□□ 0.9
HIPK3Q9H422 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.69■□□□□ 0.9
HIPK3Q9H422 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.69■□□□□ 0.9
HIPK3Q9H422 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIPK3Q9H422 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIPK3Q9H422 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.69■□□□□ 0.9
HIPK3Q9H422 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIPK3Q9H422 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIPK3Q9H422 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HIPK3Q9H422 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.69■□□□□ 0.9
HIPK3Q9H422 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HIPK3Q9H422 AC004263.2-201ENST00000617183 678 ntBASIC20.69■□□□□ 0.9
HIPK3Q9H422 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HIPK3Q9H422 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIPK3Q9H422 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.69■□□□□ 0.9
HIPK3Q9H422 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.69■□□□□ 0.9
HIPK3Q9H422 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIPK3Q9H422 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIPK3Q9H422 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIPK3Q9H422 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HIPK3Q9H422 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
HIPK3Q9H422 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIPK3Q9H422 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.69■□□□□ 0.9
HIPK3Q9H422 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HIPK3Q9H422 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK3Q9H422 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK3Q9H422 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.68■□□□□ 0.9
HIPK3Q9H422 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HIPK3Q9H422 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK3Q9H422 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms