Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC9.62□□□□□ -0.87
KRTAP3-1Q9BYR8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 AC026271.2-201ENST00000428091 497 ntBASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 AF201337.1-201ENST00000520239 748 ntBASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 PNN-205ENST00000556530 601 ntTSL 2 BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 AC105036.2-201ENST00000569468 176 ntBASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-1Q9BYR8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 AC135776.1-201ENST00000319817 2481 ntBASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms